Inferring horizontal gene transfer (original) (raw)
scientific article published in May 2015
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Inferring horizontal gene transfer |
scientific article published in May 2015 |
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instance of
scholarly article
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Journal first Wikipedia-integrated dual publishing
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title
Inferring horizontal gene transfer (English)
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main subject
inferring horizontal gene transfer
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horizontal gene transfer
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author
Christophe Dessimoz
series ordinal
4
object named as
Christophe Dessimoz
author given names
Christophe
author last names
Dessimoz
1 reference
stated in
PubMed
PubMed publication ID
26020646
retrieved
5 August 2022
Matt Ravenhall
series ordinal
1
object named as
Matt Ravenhall
author given names
Matt
author last names
Ravenhall
1 reference
stated in
PubMed
PubMed publication ID
26020646
retrieved
5 August 2022
Florent Lassalle
series ordinal
3
object named as
Florent Lassalle
author given names
Florent
author last names
Lassalle
1 reference
stated in
PubMed
PubMed publication ID
26020646
retrieved
5 August 2022
author name string
Nives Škunca
series ordinal
2
author given names
Nives
author last names
Škunca
1 reference
stated in
PubMed
PubMed publication ID
26020646
retrieved
5 August 2022
language of work or name
English
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publication date
May 2015
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significant event
union
derivative work
Wikipedia
URL
https://en.wikipedia.org/wiki/Inferring_horizontal_gene_transfer
point in time
13 June 2015
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published in
PLOS Computational Biology
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volume
11
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issue
5
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page(s)
e1004095
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copyright license
Creative Commons Attribution 4.0 International
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copyright status
copyrighted
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peer review URL
http://compbiolwiki.plos.org/wiki/Talk:Inferring_horizontal_gene_transfer
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cites work
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Genome-wide molecular clock and horizontal gene transfer in bacterial evolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4462595
retrieved
12 September 2017
Biased biological functions of horizontally transferred genes in prokaryotic genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4462595
retrieved
12 September 2017
Inferring genome trees by using a filter to eliminate phylogenetically discordant sequences and a distance matrix based on mean normalized BLASTP scores
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4462595
retrieved
12 September 2017
Detection of genes with atypical nucleotide sequence in microbial genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4462595
retrieved
12 September 2017
The emergence and evolution of methicillin-resistant Staphylococcus aureus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4462595
retrieved
12 September 2017
On surrogate methods for detecting lateral gene transfer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4462595
retrieved
12 September 2017
Structural analysis of DNA sequence: evidence for lateral gene transfer in Thermotoga maritima
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4462595
retrieved
12 September 2017
Genomic signature: characterization and classification of species assessed by chaos game representation of sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4462595
retrieved
12 September 2017
Analysis of genomic G + C content, codon usage, initiator codon context and translation termination sites in Tetrahymena thermophila
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4462595
retrieved
12 September 2017
10-11 bp periodicities in complete genomes reflect protein structure and DNA folding
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4462595
retrieved
12 September 2017
Propeller-twisting of base-pairs and the conformational mobility of dinucleotide steps in DNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4462595
retrieved
12 September 2017
Correlation of GC content with replication timing and repair mechanisms in weakly expressed E.coli genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4462595
retrieved
12 September 2017
Dinucleotide relative abundance extremes: a genomic signature
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4462595
retrieved
12 September 2017
Inference of horizontal genetic transfer from molecular data: an approach using the bootstrap
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4462595
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12 September 2017
Reconciling the many faces of lateral gene transfer.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1004095
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21 January 2018
Intragenomic base content variation is a potential source of biases when searching for horizontally transferred genes.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1004095
retrieved
21 January 2018
The closest BLAST hit is often not the nearest neighbor
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1004095
retrieved
21 January 2018
Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1004095
retrieved
21 January 2018
Frequent recombination in a saltern population of Halorubrum
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/26020646
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Subtree Transfer Operations and Their Induced Metrics on Evolutionary Trees
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1004095
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1004095
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1371/JOURNAL.PCBI.1004095
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1791114
DBLP publication ID
journals/ploscb/RavenhallSLD15
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
Fatcat ID
release_tuwn2c2nsbhg3lkbv7x3gs6jce
1 reference
stated in
Fatcat
reference URL
https://api.fatcat.wiki/v0/release/tuwn2c2nsbhg3lkbv7x3gs6jce
retrieved
24 November 2022
based on heuristic
mapped directly with Wikidata item
OpenCitations bibliographic resource ID
1791114
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1791114
PMC publication ID
4462595
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1791114
PubMed publication ID
26020646
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1791114
ResearchGate publication ID
277409266
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