R: SAM specific print method (original) (raw)
| print {siggenes} | R Documentation |
|---|
Description
Prints the statistics (FDR, number of differentially expressed genes etc.) for an object of class SAM
Usage
print(x, delta = NULL, n.digits = 3)
Arguments
| x | a SAM object |
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| delta | a numeric value or vector specifying one or a set of Deltas for which statistics as the number of differentially expressed genes and the estimated FDR should be plotted. If NULLthe Delta values of x will be used |
| n.digits | an integer specifying the number of decimal places in the output |
Note
SAM was deveoped by Tusher et al. (2001).
!!! There is a patent pending for the SAM technology at Stanford University. !!!
Author(s)
Holger Schwender, holger.schw@gmx.de
References
Tusher, V.G., Tibshirani, R., and Chu, G. (2001). Significance analysis of microarrays applied to the ionizing radiation response. PNAS, 98, 5116-5121.
See Also
sam, SAM-class, [summary](summary.sam.html)