CRAN Package Check Results for Package ORscraper (original) (raw)
Last updated on 2026-03-12 06:52:52 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.0 | 4.71 | 49.86 | 54.57 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.1.1 | 2.90 | 36.33 | 39.23 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.1 | 80.68 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.0 | ERROR | ||||
| r-devel-macos-arm64 | 0.1.1 | 1.00 | 19.00 | 20.00 | OK | |
| r-devel-windows-x86_64 | 0.1.1 | 11.00 | 83.00 | 94.00 | OK | |
| r-patched-linux-x86_64 | 0.1.0 | 4.50 | 44.59 | 49.09 | ERROR | |
| r-release-linux-x86_64 | 0.1.0 | 4.56 | 43.85 | 48.41 | OK | |
| r-release-macos-arm64 | 0.1.1 | 1.00 | 18.00 | 19.00 | OK | |
| r-release-macos-x86_64 | 0.1.1 | 3.00 | 54.00 | 57.00 | OK | |
| r-release-windows-x86_64 | 0.1.0 | 7.00 | 73.00 | 80.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.1.1 | 1.00 | 23.00 | 24.00 | OK | |
| r-oldrel-macos-x86_64 | 0.1.1 | 3.00 | 377.00 | 380.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.1 | 10.00 | 79.00 | 89.00 | OK |
Check Details
Version: 0.1.0
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/1s] Running ‘testthat.R’ [3s/7s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(ORscraper) > > test_check("ORscraper") Saving _problems/test_search_ncbi_clinvar-34.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_search_ncbi_clinvar.R:34:3'): search_ncbi_clinvar correctly retrieves pathogenicity information ── Expected `result` to equal `list(c("Pathogenic", "No results"))`. Differences: `actual[[1]]`: "Uncertain significance" "No results" `expected[[1]]`: "Pathogenic" "No results" [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] Error: ! Test failures. Execution haltedFlavor: r-devel-linux-x86_64-debian-clang
Version: 0.1.0
Check: tests
Result: ERROR Running ‘spelling.R’ Running ‘testthat.R’ Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(ORscraper) > > test_check("ORscraper") Saving _problems/test_search_ncbi_clinvar-34.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_search_ncbi_clinvar.R:34:3'): search_ncbi_clinvar correctly retrieves pathogenicity information ── Expected `result` to equal `list(c("Pathogenic", "No results"))`. Differences: `actual[[1]]`: "Uncertain significance" "No results" `expected[[1]]`: "Pathogenic" "No results" [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] Error: ! Test failures. Execution haltedFlavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.1.0
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [3s/9s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(ORscraper) > > test_check("ORscraper") Saving _problems/test_search_ncbi_clinvar-34.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_search_ncbi_clinvar.R:34:3'): search_ncbi_clinvar correctly retrieves pathogenicity information ── Expected `result` to equal `list(c("Pathogenic", "No results"))`. Differences: `actual[[1]]`: "Uncertain significance" "No results" `expected[[1]]`: "Pathogenic" "No results" [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] Error: ! Test failures. Execution haltedFlavor: r-patched-linux-x86_64
Version: 0.1.0
Check: tests
Result: ERROR Running 'spelling.R' [0s] Running 'testthat.R' [5s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(ORscraper) > > test_check("ORscraper") Saving _problems/test_extract_chip_id-10.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ── Expected `result` to equal "100.1". Differences: `actual`: "4.5" `expected`: "100.1" [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] Error: ! Test failures. Execution haltedFlavor: r-release-windows-x86_64