DAISIEprep: Extracts Phylogenetic Island Community Data from Phylogenetic Trees (original) (raw)

Extracts colonisation and branching times of island species to be used for analysis in the R package 'DAISIE'. It uses phylogenetic and endemicity data to extract the separate island colonists and store them.

Version:

1.0.0

Depends:

R (≥ 4.0)

Imports:

methods, ape, phylobase, ggplot2, scales, ggtree, DAISIE, castor, tibble, rlang

Suggests:

testthat (≥ 3.0.0), knitr, rmarkdown, covr, diversitree, corHMM, tidyr, dplyr, ggimage

Published:

2024-12-18

DOI:

10.32614/CRAN.package.DAISIEprep

Author:

Joshua W. Lambert ORCID iD [aut, cre], Luis Valente ORCID iD [aut], Pedro Santos NevesORCID iD [aut], Lizzie Roeble ORCID iD [aut], Theo Pannetier ORCID iD [aut]

Maintainer:

Joshua W. Lambert <j.w.l.lambert at rug.nl>

BugReports:

https://github.com/joshwlambert/DAISIEprep/issues

License:

GPL (≥ 3)

URL:

https://github.com/joshwlambert/DAISIEprep,https://joshwlambert.github.io/DAISIEprep/

NeedsCompilation:

no

Materials:

README, NEWS

CRAN checks:

DAISIEprep results [issues need fixing before 2025-10-31]