IDSL.IPA: Intrinsic Peak Analysis (IPA) for HRMS Data (original) (raw)
A multi-layered untargeted pipeline for high-throughput LC/HRMS data processing to extract signals of organic small molecules. The package performs ion pairing, peak detection, peak table alignment, retention time correction, aligned peak table gap filling, peak annotation and visualization of extracted ion chromatograms (EICs) and total ion chromatograms (TICs). The 'IDSL.IPA' package was introduced in <doi:10.1021/acs.jproteome.2c00120> .
| Version: | 2.9 |
|---|---|
| Depends: | R (≥ 4.0) |
| Imports: | IDSL.MXP, readxl |
| Published: | 2023-05-31 |
| DOI: | 10.32614/CRAN.package.IDSL.IPA |
| Author: | Sadjad Fakouri-Baygi [aut], Dinesh Barupal [cre, aut] |
| Maintainer: | Dinesh Barupal <dinesh.barupal at mssm.edu> |
| BugReports: | https://github.com/idslme/idsl.ipa/issues |
| License: | MIT + file |
| URL: | https://github.com/idslme/idsl.ipa |
| NeedsCompilation: | no |
| Citation: | IDSL.IPA citation info |
| CRAN checks: | IDSL.IPA results |
Documentation:
| Reference manual: | IDSL.IPA.pdf |
|---|
Downloads:
| Package source: | IDSL.IPA_2.9.tar.gz |
|---|---|
| Windows binaries: | r-devel: IDSL.IPA_2.9.zip, r-release: IDSL.IPA_2.9.zip, r-oldrel: IDSL.IPA_2.9.zip |
| macOS binaries: | r-release (arm64): IDSL.IPA_2.9.tgz, r-oldrel (arm64): IDSL.IPA_2.9.tgz, r-release (x86_64): IDSL.IPA_2.9.tgz, r-oldrel (x86_64): IDSL.IPA_2.9.tgz |
| Old sources: | IDSL.IPA archive |
Reverse dependencies:
| Reverse imports: | IDSL.CSA, IDSL.NPA, IDSL.UFA, IDSL.UFAx |
|---|
Linking:
Please use the canonical formhttps://CRAN.R-project.org/package=IDSL.IPAto link to this page.