UCSCXenaTools: Download and Explore Datasets from UCSC Xena Data Hubs (original) (raw)
Download and explore datasets from UCSC Xena data hubs, which are a collection of UCSC-hosted public databases such as TCGA, ICGC, TARGET, GTEx, CCLE, and others. Databases are normalized so they can be combined, linked, filtered, explored and downloaded.
| Version: | 1.6.1 |
|---|---|
| Depends: | R (≥ 3.5) |
| Imports: | digest, dplyr, httr, jsonlite, magrittr, methods, readr, rlang, utils |
| Suggests: | covr, knitr, prettydoc, rmarkdown, testthat (≥ 2.1.0) |
| Published: | 2025-08-21 |
| DOI: | 10.32614/CRAN.package.UCSCXenaTools |
| Author: | Shixiang Wang  [aut, cre], Xue-Song Liu [aut], Martin Morgan [ctb], Christine Stawitz [rev] (Christine reviewed the package for ropensci, see https://github.com/ropensci/software-review/issues/315), Carl Ganz [rev] (Carl reviewed the package for ropensci, see https://github.com/ropensci/software-review/issues/315) |
| Maintainer: | Shixiang Wang <w_shixiang at 163.com> |
| BugReports: | https://github.com/ropensci/UCSCXenaTools/issues |
| License: | GPL-3 |
| URL: | https://docs.ropensci.org/UCSCXenaTools/,https://github.com/ropensci/UCSCXenaTools |
| NeedsCompilation: | no |
| Citation: | UCSCXenaTools citation info |
| Materials: | README, NEWS |
| CRAN checks: | UCSCXenaTools results |
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