dartR.spatial: Applying Landscape Genomic Methods on 'SNP' and 'Silicodart' Data (original) (raw)
Provides landscape genomic functions to analyse 'SNP' (single nuclear polymorphism) data, such as least cost path analysis and isolation by distance. Therefore each sample needs to have coordinate data attached (lat/lon) to be able to run most of the functions. 'dartR.spatial' is a package that belongs to the 'dartRverse' suit of packages and depends on 'dartR.base' and 'dartR.data'.
| Version: | 0.78 |
|---|---|
| Depends: | R (≥ 3.5), adegenet (≥ 2.0.0), dartR.base, dartR.data |
| Imports: | methods, utils, crayon, StAMPP, raster, sp, tidyr, vegan, MASS, ggplot2, data.table |
| Suggests: | mmod, dismo, gdistance, gplots, rrBLUP, terra (≥ 1.7-39), sf, PopGenReport |
| Published: | 2023-11-15 |
| DOI: | 10.32614/CRAN.package.dartR.spatial |
| Author: | Bernd Gruber [aut, cre], Arthur Georges [aut], Jose L. Mijangos [aut], Carlo Pacioni [aut], Peter J. Unmack [ctb], Oliver Berry [ctb] |
| Maintainer: | Bernd Gruber <bernd.gruber at canberra.edu.au> |
| BugReports: | https://groups.google.com/g/dartr?pli=1 |
| License: | GPL (≥ 3) |
| URL: | https://green-striped-gecko.github.io/dartR/ |
| NeedsCompilation: | no |
| Citation: | dartR.spatial citation info |
| CRAN checks: | dartR.spatial results |
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