junctions: The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages (original) (raw)
Individual based simulations of hybridizing populations, where the accumulation of junctions is tracked. Furthermore, mathematical equations are provided to verify simulation outcomes. Both simulations and mathematical equations are based on Janzen (2018, <doi:10.1101/058107>) and Janzen (2022, <doi:10.1111/1755-0998.13519>).
| Version: | 2.1.3 |
|---|---|
| Depends: | RcppParallel (≥ 5.0.0) |
| Imports: | nloptr, Rcpp, tibble |
| LinkingTo: | nloptr, Rcpp, RcppParallel |
| Suggests: | dplyr, ggplot2, knitr, magrittr, rmarkdown, testthat, tidyr |
| Published: | 2025-04-09 |
| DOI: | 10.32614/CRAN.package.junctions |
| Author: | Thijs Janzen [aut, cre] |
| Maintainer: | Thijs Janzen |
| BugReports: | https://github.com/thijsjanzen/junctions/issues |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | https://thijsjanzen.github.io/junctions/ |
| NeedsCompilation: | yes |
| SystemRequirements: | C++17 |
| Citation: | junctions citation info |
| Materials: | README NEWS |
| CRAN checks: | junctions results |
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