https://www.beast2.org>) is a widely used Bayesian phylogenetic tool, that uses DNA/RNA/protein data and many model priors to create a posterior of jointly estimated phylogenies and parameters. 'mcbette' allows to do a Bayesian model comparison over some site and clock models, using 'babette' (<https://github.com/ropensci/babette/>).">

mcbette: Model Comparison Using 'babette' (original) (raw)

'BEAST2' (<https://www.beast2.org>) is a widely used Bayesian phylogenetic tool, that uses DNA/RNA/protein data and many model priors to create a posterior of jointly estimated phylogenies and parameters. 'mcbette' allows to do a Bayesian model comparison over some site and clock models, using 'babette' (<https://github.com/ropensci/babette/>).

Version:

1.15.3

Imports:

babette (≥ 2.3), beautier (≥ 2.6.2), beastier (≥ 2.4.6), curl, devtools, mauricer (≥ 2.5), Rmpfr, testit, txtplot

Suggests:

ape, ggplot2, hunspell, knitr, lintr, markdown, nLTT, phangorn, rappdirs, rmarkdown, spelling, stringr, testthat (≥ 2.1.0), tracerer

Published:

2024-08-19

DOI:

10.32614/CRAN.package.mcbette

Author:

Richèl J.C. Bilderbeek [aut, cre], Joëlle Barido-Sottani [rev] (Joëlle reviewed the package for rOpenSci, see https://github.com/ropensci/software-review/issues/360), Vikram Baliga [rev] (Vikram reviewed the package for rOpenSci, see https://github.com/ropensci/software-review/issues/360)

Maintainer:

Richèl J.C. Bilderbeek

BugReports:

https://github.com/ropensci/mcbette/issues

License:

URL:

https://github.com/ropensci/mcbette/

NeedsCompilation:

no

SystemRequirements:

BEAST2 (https://www.beast2.org/)

Language:

en-US

Citation:

mcbette citation info

In views:

CRAN checks:

mcbette results