[Numpy-discussion] Problem installing numpy on Gentoo (original) (raw)
Webb Sprague webb.sprague at gmail.com
Wed Jun 21 13:27:53 EDT 2006
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I am trying to install numpy on Gentoo (see my info below for version etc). It all seems to go fine, but when I try to import it and run the tests, I get the following error (in ipython):
In [1]: import numpy import linalg -> failed: libg2c.so.0: cannot open shared object file: No such file or directory
I have gfortran on my system, but libg2c is not part of the gcc-4.1.1 distribution anymore (maybe that is a bug with Gentoo?). I also get the same error when I run f2py from the command line.
Here is the bug I filed: http://bugs.gentoo.org/show_bug.cgi?id=136988
Info that might help:
cowboy ~ # ls /usr/lib/gcc/i686-pc-linux-gnu/4.1.1/ crtbegin.o libgcc.a libgfortran.so.1 libobjc.so.1.0.0 crtbeginS.o libgcc_eh.a libgfortran.so.1.0.0 libstdc++.a crtbeginT.o libgcc_s.so libgfortranbegin.a libstdc++.so crtend.o libgcc_s.so.1 libgfortranbegin.la libstdc++.so.6 crtendS.o libgcov.a libobjc.a libstdc++.so.6.0.8 crtfastmath.o libgfortran.a libobjc.la libstdc++_pic.a include libgfortran.la libobjc.so libsupc++.a install-tools libgfortran.so libobjc.so.1 libsupc++.la
cowboy ~ # ls /usr/lib/gcc/i686-pc-linux-gnu/3.4.6/ SYSCALLS.c.X libffi.la libobjc.la crtbegin.o libffi.so libobjc.so crtbeginS.o libfrtbegin.a libobjc.so.1 crtbeginT.o libg2c.a libobjc.so.1.0.0 crtend.o libg2c.la libstdc++.a crtendS.o libg2c.so libstdc++.la hardened.specs libg2c.so.0 libstdc++.so hardenednopie.specs libg2c.so.0.0.0 libstdc++.so.6 hardenednopiessp.specs libgcc.a libstdc++.so.6.0.3 hardenednossp.specs libgcc_eh.a libstdc++_pic.a include libgcc_s.so libsupc++.a install-tools libgcc_s.so.1 libsupc++.la libffi-2.00-beta.so libgcov.a specs libffi.a libobjc.a vanilla.specs cowboy ~ # emerge --info Portage 2.1.1_pre1-r1 (default-linux/x86/2006.0, gcc-4.1.1/vanilla, glibc-2.4-r3, 2.6.11-gentoo-r9 i686)
System uname: 2.6.11-gentoo-r9 i686 AMD Athlon(tm) Processor Gentoo Base System version 1.12.1 distcc 2.18.3 i686-pc-linux-gnu (protocols 1 and 2) (default port 3632) [disabled] ccache version 2.4 [enabled] dev-lang/python: 2.4.3-r1 dev-python/pycrypto: 2.0.1-r5 dev-util/ccache: 2.4-r2 dev-util/confcache: [Not Present] sys-apps/sandbox: 1.2.18.1 sys-devel/autoconf: 2.13, 2.59-r7 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2 sys-devel/binutils: 2.16.1-r2 sys-devel/gcc-config: 2.0.0_rc1 sys-devel/libtool: 1.5.22 virtual/os-headers: 2.6.11-r5 ACCEPT_KEYWORDS="x86 ~x86" AUTOCLEAN="yes" CBUILD="i686-pc-linux-gnu" CFLAGS=" -march=athlon -O2 -pipe -fomit-frame-pointer" CHOST="i686-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/X11/xkb" CONFIG_PROTECT_MASK="/etc/env.d /etc/eselect/compiler /etc/gconf /etc/revdep-rebuild /etc/terminfo /etc/texmf/web2c" CXXFLAGS=" -march=athlon -O2 -pipe -fomit-frame-pointer" DISTDIR="/usr/portage/distfiles" FEATURES="autoconfig ccache distlocks metadata-transfer sandbox sfperms" GENTOO_MIRRORS="http://distfiles.gentoo.org http://distro.ibiblio.org/pub/linux/distributions/gentoo" PKGDIR="/usr/portage/packages" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --delete-after --stats --timeout=180 --exclude='/distfiles' --exclude='/local' --exclude='/packages'" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="x86 X alsa apache2 apm arts avi berkdb bitmap-fonts blas cli crypt cups dba dri eds emacs emboss encode esd f77 fftw foomaticdb fortran g77 gdbm gif gnome gpm gstreamer gtk gtk2 imlib ipv6 isdnlog jpeg lapack libg++ libwww mad mikmod mime mmap motif mp3 mpeg ncurses nls nptl nptlonly objc ogg opengl oss pam pcre pdflib perl png postgres pppd python quicktime readline reflection sdl session spell spl ssl svg tcltk tcpd tidy truetype truetype-fonts type1-fonts udev unicode vorbis xml xmms xorg xv zlib elibc_glibc kernel_linux userland_GNU" Unset: CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, LDFLAGS, LINGUAS, MAKEOPTS, PORTAGE_RSYNC_EXTRA_OPTS
cowboy ~ # gcc --version i686-pc-linux-gnu-gcc (GCC) 4.1.1 (Gentoo 4.1.1) Copyright (C) 2006 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
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