[Numpy-discussion] trouble installing on fedora core 5 64 bit (original) (raw)

Charles R Harris charlesr.harris at gmail.com
Wed Jun 7 18:11:27 EDT 2006

JJ,

I had that problem, started to put the paths in explicitly, noticed that the code should work anyway, deleted my changes, ran again, and it worked fine. I can't tell you what the problem was or what the solution was, I can only say I've seen the same thing on fc5. When you do install, it is also a good idea to delete the numpy directory in site-packages beforehand.

Chuck

On 6/7/06, JJ <josh8912 at yahoo.com> wrote:

Hello. I am having some trouble getting numpy installed on an AMD 64 bit Fedora 5 machine. I have loaded atlas, blas, and lapack using yum. I can see their library files in /usr/lib64/atlas/ (files such as libblas.so.3.0). But the setup program will not run. I have obtained the latest version of numpy using svn co http://svn.scipy.org/svn/numpy/trunk numpy. I have created a site.cfg file containing: [atlas] librarydirs = /usr/lib64 atlaslibs = lapack, blas, cblas, atlas But when I try to run python setup.py install it appears that none of the libraries are seeen. I get the following error messages and output. Can anyone offer help? Thanks.

[root at fedora-newamd numpy]# python setup.py install Running from numpy source directory. No module named svnversion F2PY Version 22587 blasoptinfo: blasmklinfo: looking libraries mkl,vml,guide in /usr/local/lib but found None looking libraries mkl,vml,guide in /usr/lib but found None NOT AVAILABLE atlasblasthreadsinfo: Setting PTATLAS=ATLAS looking libraries lapack,blas,cblas,atlas in /usr/lib64/atlas but found None looking libraries lapack,blas,cblas,atlas in /usr/lib64/atlas but found None looking libraries lapack,blas,cblas,atlas in /usr/local/lib but found None looking libraries lapack,blas,cblas,atlas in /usr/local/lib but found None looking libraries lapack,blas,cblas,atlas in /usr/lib but found None looking libraries lapack,blas,cblas,atlas in /usr/lib but found None NOT AVAILABLE atlasblasinfo: looking libraries lapack,blas,cblas,atlas in /usr/lib64/atlas but found None looking libraries lapack,blas,cblas,atlas in /usr/lib64/atlas but found None looking libraries lapack,blas,cblas,atlas in /usr/local/lib but found None looking libraries lapack,blas,cblas,atlas in /usr/local/lib but found None looking libraries lapack,blas,cblas,atlas in /usr/lib but found None looking libraries lapack,blas,cblas,atlas in /usr/lib but found None NOT AVAILABLE /usr/local/numpy/numpy/distutils/systeminfo.py:1281: UserWarning: Atlas (http://math-atlas.sourceforge.net/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [atlas]) or by setting the ATLAS environment variable. warnings.warn(AtlasNotFoundError.doc) blasinfo: looking libraries blas in /usr/local/lib but found None looking libraries blas in /usr/local/lib but found None looking libraries blas in /usr/lib but found None looking libraries blas in /usr/lib but found None NOT AVAILABLE /usr/local/numpy/numpy/distutils/systeminfo.py:1290: UserWarning: Blas (http://www.netlib.org/blas/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [blas]) or by setting the BLAS environment variable. warnings.warn(BlasNotFoundError.doc) blassrcinfo: NOT AVAILABLE

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