To plot cell type tree — plotCellTypeTree (original) (raw)
Source: R/runHOPACH.R
plotCellTypeTree.Rd
To plot cell type tree
plotCellTypeTree(cutree_list, group_level = NULL)
Arguments
| cutree_list | A list indicates the hierarchical cell type tree |
|---|---|
| group_level | Indicate whether plot or not |
Value
A ggplot object visualising the HOPACH tree
Examples
data("trainClassExample_xin")
plotCellTypeTree(cellTypeTree(trainClassExample_xin))
#> Warning: Removed 3 rows containing missing values (geom_text).
