ncRNAtools (development version) (original) (raw)

This is the development version of ncRNAtools; for the stable release version, seencRNAtools.

An R toolkit for non-coding RNA

Bioconductor version: Development (3.22)

ncRNAtools provides a set of basic tools for handling and analyzing non-coding RNAs. These include tools to access the RNAcentral database and to predict and visualize the secondary structure of non-coding RNAs. The package also provides tools to read, write and interconvert the file formats most commonly used for representing such secondary structures.

Author: Lara Selles Vidal [cre, aut] ORCID: 0000-0003-2537-6824 , Rafael Ayala [aut] ORCID: 0000-0002-9332-4623 , Guy-Bart Stan [aut] ORCID: 0000-0002-5560-902X , Rodrigo Ledesma-Amaro [aut] ORCID: 0000-0003-2631-5898

Maintainer: Lara Selles Vidal <lara.selles at oist.jp>

Citation (from within R, enter citation("ncRNAtools")):

Installation

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("ncRNAtools")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ncRNAtools")

Details

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Package Archives

Follow Installation instructions to use this package in your R session.