BiocSklearn (original) (raw)

This is the released version of BiocSklearn; for the devel version, seeBiocSklearn.

interface to python sklearn via Rstudio reticulate

Bioconductor version: Release (3.21)

This package provides interfaces to selected sklearn elements, and demonstrates fault tolerant use of python modules requiring extensive iteration.

Author: Vince Carey [cre, aut]

Maintainer: Vince Carey

Citation (from within R, enter citation("BiocSklearn")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BiocSklearn")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BiocSklearn")

Details

biocViews DimensionReduction, Infrastructure, Software, StatisticalMethod
Version 1.30.0
In Bioconductor since BioC 3.6 (R-3.4) (7.5 years)
License Artistic-2.0
Depends R (>= 4.0), reticulate, methods, SummarizedExperiment
Imports basilisk
System Requirements python (>= 2.7), sklearn, numpy, pandas, h5py
URL

See More

Suggests testthat, HDF5Array, BiocStyle, rmarkdown, knitr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BiocSklearn_1.30.0.tar.gz
Windows Binary (x86_64) BiocSklearn_1.30.0.zip (64-bit only)
macOS Binary (x86_64) BiocSklearn_1.30.0.tgz
macOS Binary (arm64) BiocSklearn_1.30.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/BiocSklearn
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/BiocSklearn
Bioc Package Browser https://code.bioconductor.org/browse/BiocSklearn/
Package Short Url https://bioconductor.org/packages/BiocSklearn/
Package Downloads Report Download Stats