makecdfenv (original) (raw)

This is the released version of makecdfenv; for the devel version, seemakecdfenv.

CDF Environment Maker

Bioconductor version: Release (3.21)

This package has two functions. One reads a Affymetrix chip description file (CDF) and creates a hash table environment containing the location/probe set membership mapping. The other creates a package that automatically loads that environment.

Author: Rafael A. Irizarry , Laurent Gautier , Wolfgang Huber <w.huber at dkfz-heidelberg.de>, Ben Bolstad

Maintainer: James W. MacDonald

Citation (from within R, enter citation("makecdfenv")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("makecdfenv")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("makecdfenv")

Details

biocViews DataImport, OneChannel, Preprocessing, Software
Version 1.84.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 20 years)
License GPL (>= 2)
Depends R (>= 2.6.0), affyio
Imports Biobase, affy, methods, stats, utils
System Requirements
URL

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package makecdfenv_1.84.0.tar.gz
Windows Binary (x86_64) makecdfenv_1.84.0.zip
macOS Binary (x86_64) makecdfenv_1.84.0.tgz
macOS Binary (arm64) makecdfenv_1.84.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/makecdfenv
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/makecdfenv
Bioc Package Browser https://code.bioconductor.org/browse/makecdfenv/
Package Short Url https://bioconductor.org/packages/makecdfenv/
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