matter (original) (raw)
This is the released version of matter; for the devel version, seematter.
Out-of-core statistical computing and signal processing
Bioconductor version: Release (3.20)
Toolbox for larger-than-memory scientific computing and visualization, providing efficient out-of-core data structures using files or shared memory, for dense and sparse vectors, matrices, and arrays, with applications to nonuniformly sampled signals and images.
Author: Kylie A. Bemis <k.bemis at northeastern.edu>
Maintainer: Kylie A. Bemis <k.bemis at northeastern.edu>
Citation (from within R, enter citation("matter")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("matter")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("matter")
1. Matter 2: User guide for flexible out-of-memory data structures | HTML | R Script |
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2. Matter 2: Signal and image processing | HTML | R Script |
Reference Manual | ||
NEWS | Text | |
LICENSE | Text |
Details
biocViews | DataImport, DataRepresentation, DimensionReduction, Infrastructure, Preprocessing, Software |
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Version | 2.8.0 |
In Bioconductor since | BioC 3.4 (R-3.3) (8 years) |
License | Artistic-2.0 | file LICENSE |
Depends | R (>= 4.4), BiocParallel, Matrix, methods |
Imports | BiocGenerics, ProtGenerics, digest, irlba, stats, stats4, graphics, grDevices, parallel, utils |
System Requirements | |
URL | https://github.com/kuwisdelu/matter |
Bug Reports | https://github.com/kuwisdelu/matter/issues |
See More
Suggests | BiocStyle, knitr, testthat, plotly |
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Linking To | BH |
Enhances | |
Depends On Me | CardinalIO |
Imports Me | Cardinal |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | matter_2.8.0.tar.gz |
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Windows Binary (x86_64) | matter_2.8.0.zip |
macOS Binary (x86_64) | matter_2.8.0.tgz |
macOS Binary (arm64) | matter_2.8.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/matter |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/matter |
Bioc Package Browser | https://code.bioconductor.org/browse/matter/ |
Package Short Url | https://bioconductor.org/packages/matter/ |
Package Downloads Report | Download Stats |