RNAseqQC: Quality Control for RNA-Seq Data (original) (raw)
Functions for semi-automated quality control of bulk RNA-seq data.
| Version: | 0.2.1 |
|---|---|
| Depends: | R (≥ 4.0) |
| Imports: | AnnotationHub, AnnotationFilter, BiocGenerics, ensembldb, circlize, DESeq2, SummarizedExperiment, ComplexHeatmap, matrixStats, grid, ggpointdensity, ggrepel, ggplot2, cowplot, patchwork, purrr, dplyr, stringr, tidyr, tibble, tidyselect, magrittr |
| Suggests: | rmarkdown, knitr, recount3, apeglm, ggrastr, gghighlight |
| Published: | 2024-07-15 |
| DOI: | 10.32614/CRAN.package.RNAseqQC |
| Author: | Frederik Ziebell [cre], Frederik Ziebell  [aut], GlaxoSmithKline Research & Development Limited [cph] (GlaxoSmithKline Research & Development Limited; registered address: 980 Great West Road, Brentford, Middlesex TW8 9GS, United Kingdom) |
| Maintainer: | Frederik Ziebell <f_ziebell at web.de> |
| BugReports: | https://github.com/frederikziebell/RNAseqQC/issues |
| License: | Apache License (≥ 2) |
| URL: | https://github.com/frederikziebell/RNAseqQC |
| NeedsCompilation: | no |
| Materials: | README NEWS |
| CRAN checks: | RNAseqQC results |
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