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scPloidy: Infer Ploidy of Single Cells (original) (raw)

Compute ploidy of single cells (or nuclei) based on single-cell (or single-nucleus) ATAC-seq (Assay for Transposase-Accessible Chromatin using sequencing) data <https://github.com/fumi-github/scPloidy>.

Version: 0.6.2
Depends: R (≥ 3.5.0)
Imports: dplyr, GenomicRanges, magrittr, MASS, matrixStats, mixtools, nimble, rlang, Rsamtools, tibble, tidyr, utils
Suggests: gplots, IRanges, knitr, readr, rmarkdown, testthat (≥ 3.0.0)
Published: 2024-04-28
DOI: 10.32614/CRAN.package.scPloidy
Author: Fumihiko Takeuchi ORCID iD [aut, cre]
Maintainer: Fumihiko Takeuchi
BugReports: https://github.com/fumi-github/scPloidy/issues
License: MIT + file
NeedsCompilation: no
Materials: README
CRAN checks: scPloidy results

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