smer: Sparse Marginal Epistasis Test (original) (raw)
The Sparse Marginal Epistasis Test is a computationally efficient genetics method which detects statistical epistasis in complex traits; see Stamp et al. (2025, <doi:10.1101/2025.01.11.632557>) for details.
| Version: | 0.0.1 |
|---|---|
| Depends: | R (≥ 4.4.0) |
| Imports: | dplyr, genio, logging, mvMAPIT, Rcpp, tidyr |
| LinkingTo: | BH, Rcpp, RcppEigen, Rhdf5lib, testthat |
| Suggests: | GenomicRanges, ggplot2, knitr, rmarkdown, testthat (≥ 3.0.0), xml2 |
| Published: | 2025-01-16 |
| DOI: | 10.32614/CRAN.package.smer |
| Author: | Julian Stamp  [cre, aut], Lorin Crawford [aut], sriramlab [cph] (Author of included mailman algorithm), Blue Brain Project/EPFL [cph] (Author of included HighFive library) |
| Maintainer: | Julian Stamp <julian.d.stamp at gmail.com> |
| BugReports: | https://github.com/lcrawlab/sme/issues |
| License: | MIT + file |
| URL: | https://github.com/lcrawlab/sme, https://lcrawlab.github.io/sme/ |
| NeedsCompilation: | yes |
| SystemRequirements: | GNU make |
| Materials: | README NEWS |
| CRAN checks: | smer results |
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