Proteome Analyst (original) (raw)
Proteome Analyst (PA) is a freely available web server and online toolkit for predicting protein subcellular localization, or where a protein resides in a cell. In the field of proteomics, accurately predicting a protein's subcellular localization, or where a specific protein is located inside a cell, is an important step in the large scale study of proteins. This computational prediction problem is known as Protein subcellular localization prediction. Over the last decade, more than a dozen web servers and computer programs have been developed to attempt to solve this problem. Proteome Analyst is an example of one of the better performing subcellular prediction tools. Proteome Analyst makes predictions for both prokaryotic eukaryotic proteins using a text mining approach. Proteome Analyst
| Property | Value |
|---|---|
| dbo:abstract | Proteome Analyst (PA) is a freely available web server and online toolkit for predicting protein subcellular localization, or where a protein resides in a cell. In the field of proteomics, accurately predicting a protein's subcellular localization, or where a specific protein is located inside a cell, is an important step in the large scale study of proteins. This computational prediction problem is known as Protein subcellular localization prediction. Over the last decade, more than a dozen web servers and computer programs have been developed to attempt to solve this problem. Proteome Analyst is an example of one of the better performing subcellular prediction tools. Proteome Analyst makes predictions for both prokaryotic eukaryotic proteins using a text mining approach. Proteome Analyst was originally developed by the Proteome Analyst Research Group at the University of Alberta, and was initially released in March 2004. It was recently updated in January 2014. (en) |
| dbo:wikiPageExternalLink | http://webdocs.cs.ualberta.ca/~bioinfo/ |
| dbo:wikiPageID | 42869273 (xsd:integer) |
| dbo:wikiPageLength | 4383 (xsd:nonNegativeInteger) |
| dbo:wikiPageRevisionID | 1068556570 (xsd:integer) |
| dbo:wikiPageWikiLink | dbr:BLAST dbr:Prokaryotes dbr:Naive_Bayes_classifier dbr:David_S._Wishart dbr:Protein_subcellular_localization_prediction dbr:Proteomics dbr:Fungi dbr:Gram-negative dbr:Gram-positive dbc:Biological_databases dbr:Bioinformatics dbr:Subcellular_localization dbr:Text_mining dbr:Uniprot |
| dbp:center | University of Alberta (en) |
| dbp:curation | Manually curated (en) |
| dbp:description | For predicting protein subcellular localizations (en) |
| dbp:frequency | Last updated on 2014 (en) |
| dbp:laboratory | dbr:David_S._Wishart |
| dbp:released | 2004 (xsd:integer) |
| dbp:scope | Data input: Protein sequence in FASTA format. Data output: Localization predictions in tab delimited format. (en) |
| dbp:url | http://webdocs.cs.ualberta.ca/~bioinfo/ |
| dbp:wikiPageUsesTemplate | dbt:Infobox_biodatabase dbt:Orphan dbt:Reflist |
| dc:description | For predicting protein subcellular localizations |
| dct:subject | dbc:Biological_databases |
| rdf:type | owl:Thing schema:CreativeWork dbo:Work wikidata:Q386724 dbo:Database dul:InformationObject dbo:BiologicalDatabase |
| rdfs:comment | Proteome Analyst (PA) is a freely available web server and online toolkit for predicting protein subcellular localization, or where a protein resides in a cell. In the field of proteomics, accurately predicting a protein's subcellular localization, or where a specific protein is located inside a cell, is an important step in the large scale study of proteins. This computational prediction problem is known as Protein subcellular localization prediction. Over the last decade, more than a dozen web servers and computer programs have been developed to attempt to solve this problem. Proteome Analyst is an example of one of the better performing subcellular prediction tools. Proteome Analyst makes predictions for both prokaryotic eukaryotic proteins using a text mining approach. Proteome Analyst (en) |
| rdfs:label | Proteome Analyst (en) |
| owl:sameAs | freebase:Proteome Analyst wikidata:Proteome Analyst https://global.dbpedia.org/id/n6nf |
| prov:wasDerivedFrom | wikipedia-en:Proteome_Analyst?oldid=1068556570&ns=0 |
| foaf:homepage | http://webdocs.cs.ualberta.ca/~bioinfo/ |
| foaf:isPrimaryTopicOf | wikipedia-en:Proteome_Analyst |
| is foaf:primaryTopic of | wikipedia-en:Proteome_Analyst |