Whalefall-1 RNA motif (original) (raw)
The Whalefall-1 RNA motif (also called wf-1) refers to a conserved RNA structure that was discovered using bioinformatics. Structurally, the motif consists of two stem-loops (see diagram), the second of which is often terminated by a CUUG tetraloop, which is an energetically favorable RNA sequence. Whalefall-1 RNAs are found only in DNA extracted from uncultivated bacteria found on whale fall, i.e., a whale carcass. As of 2010, Whalefall-1 RNAs have not been detected in any known, cultivated species of bacteria, and are thus one of several RNAs present in environmental samples.
| Property | Value |
|---|---|
| dbo:abstract | The Whalefall-1 RNA motif (also called wf-1) refers to a conserved RNA structure that was discovered using bioinformatics. Structurally, the motif consists of two stem-loops (see diagram), the second of which is often terminated by a CUUG tetraloop, which is an energetically favorable RNA sequence. Whalefall-1 RNAs are found only in DNA extracted from uncultivated bacteria found on whale fall, i.e., a whale carcass. As of 2010, Whalefall-1 RNAs have not been detected in any known, cultivated species of bacteria, and are thus one of several RNAs present in environmental samples. (en) |
| dbo:thumbnail | wiki-commons:Special:FilePath/Whalefall-1-RNA.svg?width=300 |
| dbo:wikiPageID | 26953519 (xsd:integer) |
| dbo:wikiPageLength | 1904 (xsd:nonNegativeInteger) |
| dbo:wikiPageRevisionID | 1059159982 (xsd:integer) |
| dbo:wikiPageWikiLink | dbr:DNA dbr:Whale_fall dbr:RNAs_present_in_environmental_samples dbr:Bacteria dbc:Non-coding_RNA dbr:Whale dbr:RNA dbr:Stem-loop dbr:Bioinformatics dbr:Tetraloop |
| dbp:caption | Consensus secondary structure of Whalefall-1 RNAs (en) |
| dbp:id | RF01762 (en) |
| dbp:name | Whalefall-1 RNA motif (en) Whalefall-1 RNA (en) |
| dbp:rfam | RF01762 (en) |
| dbp:rnaType | sRNA (en) |
| dbp:symbol | wf-1 (en) |
| dbp:taxDomain | Whale fall metagenome (en) |
| dbp:wikiPageUsesTemplate | dbt:Primary_sources dbt:Infobox_rfam dbt:Molecular-cell-biology-stub dbt:Rfam |
| dct:subject | dbc:Non-coding_RNA |
| gold:hypernym | dbr:Bioinformatics |
| rdf:type | dbo:Work |
| rdfs:comment | The Whalefall-1 RNA motif (also called wf-1) refers to a conserved RNA structure that was discovered using bioinformatics. Structurally, the motif consists of two stem-loops (see diagram), the second of which is often terminated by a CUUG tetraloop, which is an energetically favorable RNA sequence. Whalefall-1 RNAs are found only in DNA extracted from uncultivated bacteria found on whale fall, i.e., a whale carcass. As of 2010, Whalefall-1 RNAs have not been detected in any known, cultivated species of bacteria, and are thus one of several RNAs present in environmental samples. (en) |
| rdfs:label | Whalefall-1 RNA motif (en) |
| owl:sameAs | freebase:Whalefall-1 RNA motif wikidata:Whalefall-1 RNA motif https://global.dbpedia.org/id/4xn6g |
| prov:wasDerivedFrom | wikipedia-en:Whalefall-1_RNA_motif?oldid=1059159982&ns=0 |
| foaf:depiction | wiki-commons:Special:FilePath/Whalefall-1-RNA.svg |
| foaf:isPrimaryTopicOf | wikipedia-en:Whalefall-1_RNA_motif |
| is dbo:wikiPageWikiLink of | dbr:PotC_RNA_motif dbr:RNAs_present_in_environmental_samples |
| is foaf:primaryTopic of | wikipedia-en:Whalefall-1_RNA_motif |
