Campylobacter jejuni/coli (original) (raw)

Source of isolates submitted to the Campylobacter jejuni/coli database

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The MLST scheme hosted in this database is described in Dingle et al. 2001 J Clin Microbiol **39:**14-23. The cgMLST scheme is described in Cody et al. 2017 J Clin Microbiol **55:**2086-2097.

Database curated by frances.collesbiology.ox.ac.uk (Frances Colles).

• Primers and conditions
  • MLST
  • MOMP
• Campylobacteriosis sentinel surveillance in Oxfordshire, UK

The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, **3:**124 [version 1; referees: 2 approved].

Typing The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST). Allele sequences: 2,502,761 Last updated: 2025-01-08

Isolate collection The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies. Isolates: 137,985 Last updated: 2025-01-10

Genome collection A subset of records within the isolate database may contain genomes assemblies. You can access these from the isolate database by filtering on sequence bin size in a query. Genomes: 87,559 Last updated: 2025-01-08

Updates

2020-05-27

We are very sad to announce the death of Alison Cody, our long-standing colleague and curator of this database, who passed away on 13 May, 2020 at Sobell House, Oxford. See more...