signatureSearchData (development version) (original) (raw)

This is the development version of signatureSearchData; for the stable release version, seesignatureSearchData.

Datasets for signatureSearch package

Bioconductor version: Development (3.22)

CMAP/LINCS hdf5 databases and other annotations used for signatureSearch software package.

Author: Yuzhu Duan , Brendan Gongol , Thomas Girke <thomas.girke at ucr.edu>

Maintainer: Brendan Gongol

Citation (from within R, enter citation("signatureSearchData")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("signatureSearchData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("signatureSearchData")

Details

biocViews ExperimentData, ExperimentHub, ExpressionData
Version 1.23.0
License Artistic-2.0
Depends R (>= 3.6)
Imports ExperimentHub, utils, affy, limma, Biobase, magrittr, dplyr, R.utils, stats, rhdf5
System Requirements
URL

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Suggests knitr, rmarkdown
Linking To
Enhances
Depends On Me DFD
Imports Me
Suggests Me signatureSearch
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package signatureSearchData_1.23.0.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/signatureSearchData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/signatureSearchData
Package Short Url https://bioconductor.org/packages/signatureSearchData/
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