AutoScore: An Interpretable Machine Learning-Based Automatic Clinical Score Generator (original) (raw)
A novel interpretable machine learning-based framework to automate the development of a clinical scoring model for predefined outcomes. Our novel framework consists of six modules: variable ranking with machine learning, variable transformation, score derivation, model selection, domain knowledge-based score fine-tuning, and performance evaluation.The The original AutoScore structure is described in the research paper<doi:10.2196/21798>. A full tutorial can be found here<https://nliulab.github.io/AutoScore/>. Users or clinicians could seamlessly generate parsimonious sparse-score risk models (i.e., risk scores), which can be easily implemented and validated in clinical practice. We hope to see its application in various medical case studies.
Version: | 1.0.0 |
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Depends: | R (≥ 3.5.0) |
Imports: | tableone, pROC, randomForest, ggplot2, knitr, Hmisc, car, coxed, dplyr, ordinal, survival, tidyr, plotly, magrittr, randomForestSRC, rlang, survAUC, survminer |
Suggests: | rpart, rmarkdown |
Published: | 2022-10-15 |
DOI: | 10.32614/CRAN.package.AutoScore |
Author: | Feng Xie [aut, cre], Yilin Ning [aut], Han Yuan [aut], Mingxuan Liu [aut], Seyed Ehsan Saffari [aut], Siqi Li [aut], Bibhas Chakraborty [aut], Nan Liu [aut] |
Maintainer: | Feng Xie |
BugReports: | https://github.com/nliulab/AutoScore/issues |
License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
URL: | https://github.com/nliulab/AutoScore |
NeedsCompilation: | no |
Citation: | AutoScore citation info |
CRAN checks: | AutoScore results |
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