ruminate: A Pharmacometrics Data Transformation and Analysis Tool (original) (raw)
Exploration of pharmacometrics data involves both general tools (transformation and plotting) and specific techniques (non-compartmental analysis). This kind of exploration is generally accomplished by utilizing different packages. The purpose of 'ruminate' is to create a 'shiny' interface to make these tools more broadly available while creating reproducible results.
Version:
0.3.2
Depends:
R (≥ 4.2.0)
Imports:
digest, dplyr, DT, flextable, formods (≥ 0.2.0), ggplot2, onbrand (≥ 1.0.3), PKNCA (≥ 0.10.2), plotly, rhandsontable, rlang, shiny, shinyAce, shinyWidgets, stats, stringr, tidyr, utils, yaml, zip
Suggests:
babelmixr2, cli, clipr, gridExtra, knitr, nlmixr2lib (≥ 0.3.0), nonmem2rx, nlmixr2 (≥ 3.0.0), prompter, rmarkdown, readxl, rxode2 (≥ 3.0.0), shinybusy, shinydashboard, testthat (≥ 3.0.0), ubiquity
Published:
2025-11-04
DOI:
10.32614/CRAN.package.ruminate
Author:
Maintainer:
John Harrold <john.m.harrold at gmail.com>
BugReports:
https://github.com/john-harrold/ruminate/issues
License:
BSD_2_clause + file
URL:
https://ruminate.ubiquity.tools/
NeedsCompilation:
no
Materials:
In views:
CRAN checks: