Exposure to dsRNA Elicits RNA Interference in Brachionus manjavacas (Rotifera) (original) (raw)
Boell LA, Bucher G (2008) Whole-mount in situ hybridization in the Rotifer Brachionus plicatilis representing a basal branch of lophotrochozoans. Dev Genes Evol 218:445–451 ArticlePubMedCAS Google Scholar
Cerutti H, Casas-Mollano JA (2006) On the origin and functions of RNA-mediated silencing: from protists to man. Curr Genet 50:81–99 ArticlePubMedCAS Google Scholar
Chera S, de Rosa R, Miljkovic-Licina M, Dobretz K, Ghila L, Kaloulis K, Galliot B (2006) Silencing of the hydra serine protease inhibitor Kazal1 gene mimics the human SPINK1 pancreatic phenotype. J Cell Sci 119:846–857 ArticlePubMedCAS Google Scholar
Clemens JC, Worby CA, Simonson-Leff N, Muda M, Maehama T, Hemmings BA, Dixon JE (2000) Use of double-stranded RNA interference in Drosophila cell lines to dissect signal transduction pathways. Proc Natl Acad Sci USA 97:6499–6503 ArticlePubMedCAS Google Scholar
Dalby B, Cates S, Harris A, Ohki EC, Tilkins ML, Price PJ, Ciccarone VC (2004) Advanced transfection with Lipofectamine 2000 reagent: primary neurons, siRNA, and high-throughput applications. Methods 33:95–103 ArticlePubMedCAS Google Scholar
Denekamp NY, Thorne MAS, Clark MS, Kube M, Reinhardt R, Lubzens E (2009) Discovering genes associated with dormancy in the monogonont rotifer Brachionus plicatilis. BMC Genomics 10:108 ArticlePubMed Google Scholar
Dunn CW, Hejnol A, Matus DQ, Pang K, Browne WE, Smith SA, Seaver E, Rouse GW, Obst M, Edgecombe GD, Sorensen MV, Haddock SHD, Schmidt-Rhaesa A, Okusu A, Kristensen RM, Wheeler WC, Martindale MQ, Giribet G (2008) Broad phylogenomic sampling improves resolution of the animal tree of life. Nature 452:745 ArticlePubMedCAS Google Scholar
Felgner PL, Gadek TR, Holm M, Roman R, Chan HW, Wenz M, Northrop JP, Ringold GM, Danielsen M (1987) Lipofection—a highly efficient, lipid-mediated DNA-transfection procedure. Proc Natl Acad Sci USA 84:7413–7417 ArticlePubMedCAS Google Scholar
Fire A, Xu SQ, Montgomery MK, Kostas SA, Driver SE, Mello CC (1998) Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature 391:806–811 ArticlePubMedCAS Google Scholar
Fontaneto D, Giordani I, Melone G, Serra M (2007) Disentangling the morphological stasis in two rotifer species of the Brachionus plicatilis species complex. Hydrobiologia 583:297–307 Article Google Scholar
Fraser AG, Kamath RS, Zipperlen P, Martinez-Campos M, Sohrmann M, Ahringer J (2000) Functional genomic analysis of C. elegans chromosome I by systematic RNA interference. Nature 408:325–330 ArticlePubMedCAS Google Scholar
Gilbert JJ (1983) Rotifera. In: Adiyodi KG, Adiyodi RG (eds) Reproductive biology of invertebrates, vol I. Oogenesis, oviposition, and oosorption. Wiley, New York, pp 181–209 Google Scholar
Gomez A, Serra M, Carvalho GR, Lunt DH (2002) Speciation in ancient cryptic species complexes: evidence from the molecular phylogeny of Brachionus plicatilis (Rotifera). Evolution 56:1431–1444 PubMedCAS Google Scholar
Guerra C, Wada Y, Leick V, Bell A, Satir P (2003) Cloning, localization, and axonemal function of Tetrahymena centrin. Mol Biol Cell 14:251–261 ArticlePubMedCAS Google Scholar
Jacobsen LB, Calvin SA, Colvin KE, Wright M (2004) FuGENE 6 transfection reagent: the gentle power. Methods 33:104–112 ArticlePubMedCAS Google Scholar
Jakob W, Schierwater B (2007) Changing hydrozoan bauplans by silencing Hox-like genes. PLoS ONE 2:e694 ArticlePubMed Google Scholar
Kamath RS, Fraser AG, Dong Y, Poulin G, Durbin R, Gotta M, Kanapin A, Le Bot N, Moreno S, Sohrmann M, Welchman DP, Zipperlen P, Ahringer J (2003) Systematic functional analysis of the Caenorhabditis elegans genome using RNAi. Nature 421:231–237 ArticlePubMedCAS Google Scholar
Kennerdell JR, Yamaguchi S, Carthew RW (2002) RNAi is activated during Drosophila oocyte maturation in a manner dependent on aubergine and spindle-E. Genes Dev 16:1884–1889 ArticlePubMedCAS Google Scholar
Lai SR, Andrews LG, Tollefsbol TO (2008) hTERT knockdown in human embryonic kidney cells using double-stranded RNA. Meth Mol Biol 405:23–29 Article Google Scholar
Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the \( {{2}^{ - \Delta \Delta C{\rm{T}}}} \) method. Methods 25:402–408 ArticlePubMedCAS Google Scholar
Mehier-Humbert S, Guy RH (2005) Physical methods for gene transfer: improving the kinetics of gene delivery into cells. Adv Drug Del Rev 57:733–753 ArticleCAS Google Scholar
Orii H, Mochii M, Watanabe K (2003) A simple “soaking method” for RNA interference in the planarian Dugesia japonica. Dev Genes Evol 213:138–141 PubMedCAS Google Scholar
Paps J, Baguna J, Riutort M (2009) Lophotrochozoa internal phylogeny: new insights from an up-to-date analysis of nuclear ribosomal genes. Proc R Soc B: Biol Sci 276:1245–1254 CAS Google Scholar
Patel A, Fondrk MK, Kaftanoglu O, Emore C, Hunt G, Frederick K, Amdam GV (2007) The making of a queen: TOR pathway is a key player in diphenic caste development. PLoS ONE 2:e509 ArticlePubMed Google Scholar
Ricci C (2001) Dormancy patterns in rotifers. Hydrobiologia 446:1–11 Article Google Scholar
Schmitt A, Nebreda AR (2002) Signalling pathways in oocyte meiotic maturation. J Cell Sci 115:2457–2459 PubMedCAS Google Scholar
Schroder T (2005) Diapause in monogonont rotifers. Hydrobiologia 546:291–306 Article Google Scholar
Serra M, Gomez A, Carmona MJ (1998) Ecological genetics of Brachionus sympatric sibling species. Hydrobiologia 388:373–384 Article Google Scholar
Shabalina SA, Koonin EV (2008) Origins and evolution of eukaryotic RNA interference. Trends Ecol Evol 23:578–587 ArticlePubMed Google Scholar
Shearer TL, Snell TW (2007) Transfection of siRNA into Brachionus plicatilis (Rotifera). Hydrobiologia 593:141–150 ArticleCAS Google Scholar
Snell TW (1998) Chemical ecology of rotifers. Hydrobiologia 388:267–276 Article Google Scholar
Snell TW, Nacionales MA (1990) Sex-pheromone communication in Brachionus plicatilis (Rotifera). Comp Biochem Physiol 97:211–216 Article Google Scholar
Snell TW, Stelzer CP (2005) Removal of surface glycoproteins and transfer among Brachionus species. Hydrobiologia 546:267–274 ArticleCAS Google Scholar
Snell TW, DesRosiers NJD (2008) Effect of progesterone on sexual reproduction of Brachionus manjavacas (Rotifera). J Exp Mar Biol Ecol 363:104–109 ArticleCAS Google Scholar
Snell TW, Kubanek J, Carter W, Payne AB, Kim J, Hicks MK, Stelzer CP (2006) A protein signal triggers sexual reproduction in Brachionus plicatilis (Rotifera). Mar Biol 149:763–773 ArticleCAS Google Scholar
Snell TW, Kim J, Zelaya E, Resop R (2007) Mate choice and sexual conflict in Brachionus plicatilis (Rotifera). Hydrobiologia 593:151–157 Article Google Scholar
Snell TW, Shearer TL, Smith HA, Kubanek J, Gribble KE, Mark Welch DB (2009) Genetic determinants of mate recognition in Brachionus manjavacas (Rotifera). BMC Biol 7:60 ArticlePubMed Google Scholar
Sorgeloos P, Dhert P, Candreva P (2001) Use of the brine shrimp, Artemia spp., in marine fish larviculture. Aquaculture 200:147–159 Article Google Scholar
Stelzer CP (2005) Evolution of rotifer life histories. Hydrobiologia 546:335–346 Article Google Scholar
Suga K, Welch DM, Tanaka Y, Sakakura Y, Hagiwara A (2007) Analysis of expressed sequence tags of the cyclically parthenogenetic rotifer Brachionus plicatilis. PLoS ONE 2:e671 ArticlePubMed Google Scholar
Tiscornia G, Singer O, Ikawa M, Verma IM (2003) A general method for gene knockdown in mice by using lentiviral vectors expressing small interfering RNA. Proc Natl Acad Sci USA 100:1844–1848 ArticlePubMedCAS Google Scholar
Varma R, Cheng A (2008) Calculating gene expression changes and variability in siRNA experiments. Applied Biosystems TechNotes 15(2):10–11 Google Scholar
Whyard S, Singh AD, Wong S (2009) Ingested double-stranded RNAs can act as species-specific insecticides. Insect Biochem Mol Biol 39:824–832 ArticlePubMedCAS Google Scholar