Structure of the bacteriophage φ29 DNA packaging motor (original) (raw)
References
Hendrix, R. W. Symmetry mismatch and DNA packaging in large bacteriophages. Proc. Natl Acad. Sci. USA75, 4779–4783 (1978). ArticleADSCAS Google Scholar
Hendrix, R. W. Bacteriophage DNA packaging: RNA gears in a DNA transport machine. Cell94, 147–150 (1998). ArticleCAS Google Scholar
Zhou, Z. H., Chen, D. H., Jakana, J., Rixon, F. J. & Chiu, W. Visualization of tegument-capsid interactions and DNA in intact herpes simplex virus type 1 virions. J. Virol.73, 3210–3218 (1999). CASPubMedPubMed Central Google Scholar
Anderson, D. L., Hickman, D. D. & Reilly, B. E. Structure of Bacillus subtilis bacteriophage φ29 and the length of φ29 deoxyribonucleic acid. J. Bacteriol.91, 2081–2089 (1966). CASPubMedPubMed Central Google Scholar
Tao, Y. et al. Assembly of a tailed bacterial virus and its genome release studied in three dimensions. Cell95, 431–437 (1998). ArticleCAS Google Scholar
Valpuesta, J. M. & Carrascosa, J. L. Structure of viral connectors and their function in bacteriophage assembly and DNA packaging. Q. Rev. Biophys.27, 107–155 (1994). ArticleCAS Google Scholar
Guo, P., Erickson, S. & Anderson, D. A small viral RNA is required for in vitro packaging of bacteriophage φ29 DNA. Science236, 690–694 (1987). ArticleADSCAS Google Scholar
Zhang, F. et al. Function of hexameric RNA in packaging of bacteriophage φ29 DNA in vitro. Mol. Cell2, 141–147 (1998). ArticleCAS Google Scholar
Guo, P., Zhang, C., Chen, C., Garver, K. & Trottier, M. Inter-RNA interaction of phage φ29 pRNA to form a hexameric complex for viral DNA transportation. Mol. Cell2, 149–155 (1998). ArticleCAS Google Scholar
Müller, D. J., Engel, A., Carrascosa, J. L. & Vélez, M. The bacteriophage φ29 head-tail connector imaged at high resolution with the atomic force microscope in buffer solution. EMBO J.16, 2547–2553 (1997). Article Google Scholar
Valpuesta, J. M., Fernández, J. J., Carazo, J. M. & Carrascosa, J. L. The three-dimensional structure of a DNA translocating machine at 10 Å resolution. Structure7, 289–296 (1999). ArticleCAS Google Scholar
Valle, M. et al. Domain architecture of the bacteriophage φ29 connector protein. J. Mol. Biol.288, 899–909 (1999). ArticleCAS Google Scholar
Guasch, A. et al. Crystallographic analysis reveals the 12-fold symmetry of the bacteriophage φ29 connector particle. J. Mol. Biol.281, 219–225 (1998). ArticleCAS Google Scholar
Badasso, M. O. et al. Purification, crystallization, and initial X-ray analysis of the head-tail connector of bacteriophage φ29. Acta Crystallogr. D56, 1187–1190 (2000). ArticleCAS Google Scholar
Vlcek, C. & Paces, V. Nucleotide sequence of the late region of Bacillus φ29 completes the 19285-bp sequence of φ29 genome. Comparison with the homologous sequence of phage PZA. Gene46, 215–225 (1986). ArticleCAS Google Scholar
Grimes, S. & Anderson, D. RNA dependence of the bacteriophage φ29 DNA packaging ATPase. J. Mol. Biol.215, 559–566 (1990). ArticleCAS Google Scholar
Donate, L. E., Valpuesta, J. M., Mier, C., Rojo, F. & Carrascosa, J. L. Characterization of an RNA-binding domain in the bacteriophage φ29 connector. J. Biol. Chem.268, 20198–20204 (1993). CASPubMed Google Scholar
Reinisch, K. M., Nibert, M. L. & Harrison, S. C. Structure of the reovirus core at 3.6 Å resolution. Nature404, 960–967 (2000). ArticleADSCAS Google Scholar
Ibarra, B. et al. Topology of the components of the DNA packaging machinery in the phage φ29 prohead. J. Mol. Biol.298, 807–815 (2000). ArticleCAS Google Scholar
Guo, P., Peterson, C. & Anderson, D. Prohead and DNA-gp3-dependent ATPase activity of the DNA packaging protein gp16 of bacteriophage φ29. J. Mol. Biol.197, 229–236 (1987). ArticleCAS Google Scholar
Dube, P., Tavares, P., Lurz, R. & van Heel, M. The portal protein of bacteriophage SPP1: a DNA pump with 13-fold symmetry. EMBO J.12, 1303–1309 (1993). ArticleCAS Google Scholar
Abrahams, J. P., Leslie, A. G. W., Lutter, R. & Walker, J. E. Structure at 2.8 Å resolution of F1-ATPase from bovine heart mitochondria. Nature370, 621–628 (1994). ArticleADSCAS Google Scholar
Silverman, M. R. & Simon, M. I. Flagellar rotation and the mechanism of bacterial motility. Nature249, 73–74 (1974). ArticleADSCAS Google Scholar
Vale, R. D. & Milligan, R. A. The way things move: looking under the hood of molecular motor proteins. Science288, 88–95 (2000). ArticleADSCAS Google Scholar
Rossmann, M. G. & Arnold, E. International Table for CrystallographyVol. F (International Union of Crystallography, Kluwer Academic, Dordrecht) (in the press).
Baker, T. S. & Cheng, R. H. A model-based approach for determining orientations of biological macromolecules imaged by cryoelectron microscopy. J. Struct. Biol.116, 120–130 (1996). ArticleCAS Google Scholar
Bailey, S. et al. Phylogenetic analysis and secondary structure of the Bacillus subtilis bacteriophage RNA required for DNA packaging. J. Biol. Chem.265, 22365–22370 (1990). CASPubMed Google Scholar
Reid, R. J. D., Bodley, J. W. & Anderson, D. Identification of bacteriophage φ29 prohead RNA domains necessary for in vitro DNA-gp3 packaging. J. Biol. Chem.269, 9084–9089 (1994). CASPubMed Google Scholar