Extensive and divergent circadian gene expression in liver and heart (original) (raw)
Balsalobre, A., Damiola, F. & Schibler, U. A serum shock induces circadian gene expression in mammalian tissue culture cells. Cell93, 929–937 (1998) ArticleCAS Google Scholar
Yamazaki, S. et al. Resetting central and peripheral circadian oscillators in transgenic rats. Science288, 682–685 (2000) ArticleADSCAS Google Scholar
Balsalobre, A. et al. Resetting of circadian time in peripheral tissues by glucocorticoid signaling. Science289, 2344–2347 (2000) ArticleADSCAS Google Scholar
McNamara, P. et al. Regulation of CLOCK and MOP4 by nuclear hormone receptors in the vasculature: a humoral mechanism to reset a peripheral clock. Cell105, 877–889 (2001) ArticleCAS Google Scholar
Reppert, S. M. & Weaver, D. R. Molecular analysis of mammalian circadian rhythms. Annu. Rev. Physiol.63, 647–676 (2001) ArticleCAS Google Scholar
Ripperger, J. A. & Schibler, U. Circadian regulation of gene expression in animals. Curr. Opin. Cell Biol.13, 357–362 (2001) ArticleCAS Google Scholar
Lockhart, D. J. et al. Expression monitoring by hybridization to high-density oligonucleotide arrays. Nature Biotechnol.14, 1675–1680 (1996) ArticleCAS Google Scholar
Li, C. & Wong, W. H. Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection. Proc. Natl Acad. Sci. USA98, 31–36 (2001) ArticleADSCAS Google Scholar
Claverie, J.-M. Gene number: what if there are only 30,000 human genes? Science291, 1255–1257 (2001) ArticleCAS Google Scholar
Murphy, W. J., Stanyon, R. & O'Brien, S. J. Evolution of mammalian genome organization inferred from comparative gene mapping. Genome Biol. (Review)2, 0005.1–0005.8 (2001) Google Scholar
Kornmann, B., Preitner, N., Rifat, D., Fleury-Olela, F. & Schibler, U. Analysis of circadian liver gene expression by ADDER, a highly sensitive method for the display of differentially expressed mRNAs. Nucleic Acids Res.29, E51 (2001) ArticleCAS Google Scholar
Velculescu, V. E. et al. Analysis of human transcriptomes. Nature Genet.23, 387–388 (1999) ArticleCAS Google Scholar
Klein, D. C., Moore, R. Y. & Reppert, S. M. (eds) Suprachiasmatic Nucleus: The Mind's Clock (Oxford Univ. Press, New York, 1991) Google Scholar
Grundschober, C. et al. Circadian regulation of diverse gene products revealed by mRNA expression profiling of synchronized fibroblasts. J. Biol. Chem.276, 46751–46758 (2001) ArticleCAS Google Scholar
Ashburner, M. et al. Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nature Genet.25, 25–29 (2000) ArticleCAS Google Scholar
Torra, I. P. et al. Circadian and glucocorticoid regulation of Rev-erb-alpha expression in liver. Endocrinology141, 3799–3806 (2000) ArticleCAS Google Scholar
Ripperger, J. A., Shearman, L. P., Reppert, S. M. & Schibler, U. CLOCK, an essential pacemaker component, controls expression of the circadian transcription factor DBP. Genes Dev.14, 679–689 (2000) CASPubMedPubMed Central Google Scholar
Young, M. W. & Kay, S. A. Time zones: a comparative genetics of circadian clocks. Nature Rev. Genet.2, 702–715 (2001) ArticleCAS Google Scholar
Tata, J. R., Baker, B. S., Machuca, I., Rabelo, E. M. & Yamauchi, K. Autoinduction of nuclear receptor genes and its significance. J. Steroid Biochem. Mol. Biol.46, 105–119 (1993) ArticleCAS Google Scholar
Kalsbeek, A., Fliers, E., Franke, A. N., Worte, J. & Buijs, R. M. Functional connections between the suprachiasmatic nucleus and the thyroid gland as revealed by lesioning and viral tracing techniques in the rat. Endocrinology141, 3832–3841 (2000) ArticleCAS Google Scholar
Harris, H. J., Kotelevtsev, Y., Mullins, J. J., Seckl, J. R. & Holmes, M. C. Intracellular regeneration of glucocorticoids by 11beta-hydroxysteroid dehydrogenase (11beta-HSD)-1 plays a key role in regulation of the hypothalamic-pituitary-adrenal axis: analysis of 11beta-HSD-1-deficient mice. Endocrinology142, 114–120 (2001) ArticleCAS Google Scholar
Chen, J., Maltby, K. M. & Miano, J. M. A novel retinoid-response gene set in vascular smooth muscle cells. Biochem. Biophys. Res. Commun.281, 475–482 (2001) ArticleCAS Google Scholar
Wolf, F. W. et al. B94, a primary response gene inducible by tumour necrosis factor-alpha, is expressed in developing hematopoietic tissues and the sperm acrosome. J. Biol. Chem.269, 3633–3640 (1994) CASPubMed Google Scholar
Cooper, P., Potter, S., Mueck, B., Yousefi, S. & Jarai, G. Identification of genes induced by inflammatory cytokines in airway epithelium. Am. J. Physiol. Lung Cell. Mol. Physiol.280, L841–L852 (2001) ArticleCAS Google Scholar
Buchan, P. et al. Repeated topical administration of all-trans-retinoic acid and plasma levels of retinoic acids in humans. J. Am. Acad. Dermatol.30, 428–434 (1994) ArticleCAS Google Scholar
Petrovsky, N. & Harrison, L. C. The chronobiology of human cytokine production. Int. Rev. Immunol.16, 635–649 (1998) ArticleCAS Google Scholar
Harmer, S. L. et al. Orchestrated transcription of key pathways in Arabidopsis by the circadian clock. Science290, 2110–2113 (2000) ArticleADSCAS Google Scholar
Claridge-Chang, A. et al. Circadian regulation of gene expression systems in the Drosophila head. Neuron32, 657–671 (2001) ArticleCAS Google Scholar
McDonald, M. J. & Rosbash, M. Microarray analysis and organization of circadian gene expression in Drosophila. Cell107, 567–578 (2001) ArticleCAS Google Scholar
Panda, S. J. et al. Coordinated transcription of key pathways in the mouse by the circadian clock. Cell [online 2 April 2001] 10.1016/S0092867402007225 (2002)