Methylation of an intronic region regulates miR-199a in testicular tumor malignancy (original) (raw)

• Aleman A, Cebrian V, Alvarez M, Lopez V, Orenes E, Lopez-Serra L et al. (2008). Identification of PMF1 methylation in association with bladder cancer progression. Clin Cancer Res 14: 8236–8243.
  Article CAS Google Scholar
• Andrews PW, Damjanov I, Simon D, Banting GS, Carlin C, Dracopoli NC et al. (1984). Pluripotent embryonal carcinoma clones derived from the human teratocarcinoma cell line Tera-2. Differentiation in vivo and in vitro. Lab Invest 50: 147–162.
  CAS PubMed Google Scholar
• Casey G, Neville PJ, Liu X, Plummer SJ, Cicek MS, Krumroy LM et al. (2006). Podocalyxin variants and risk of prostate cancer and tumor aggressiveness. Hum Mol Genet 15: 735–741.
  Article CAS Google Scholar
• Chakrabarty A, Tranguch S, Daikoku T, Jensen K, Furneaux H, Dey SK . (2007). MicroRNA regulation of cyclooxygenase-2 during embryo implantation. Proc Natl Acad Sci USA 104: 15144–15149.
  Article CAS Google Scholar
• Chen R, Alvero AB, Silasi DA, Kelly MG, Fest S, Visintin I et al. (2008). Regulation of IKKbeta by miR-199a affects NF-kappaB activity in ovarian cancer cells. Oncogene 27: 4712–4723.
  Article CAS Google Scholar
• Cheung HH, Lee TL, Davis AJ, Taft DH, Rennert OM, Chan WY . (2010). Genome-wide DNA methylation profiling reveals novel epigenetically regulated genes and non-coding RNAs in human testicular cancer. Br J Cancer 102: 419–427.
  Article CAS Google Scholar
• Cheung HH, Lee TL, Rennert OM, Chan WY . (2009). DNA methylation of cancer genome. Birth Defects Res C Embryo Today 87: 335–350.
  Article CAS Google Scholar
• Eads CA, Danenberg KD, Kawakami K, Saltz LB, Blake C, Shibata D et al. (2000). MethyLight: a high-throughput assay to measure DNA methylation. Nucleic Acids Res 28: E32.
  Article CAS Google Scholar
• Esquela-Kerscher A, Slack FJ . (2006). Oncomirs—microRNAs with a role in cancer. Nat Rev Cancer 6: 259–269.
  Article CAS Google Scholar
• Fornari F, Milazzo M, Chieco P, Negrini M, Calin GA, Grazi GL et al. (2010). MiR-199a-3p regulates mTOR and c-Met to influence the doxorubicin sensitivity of human hepatocarcinoma cells. Cancer Res 70: 5184–5193.
  Article CAS Google Scholar
• Friedman LM, Dror AA, Mor E, Tenne T, Toren G, Satoh T et al. (2009). MicroRNAs are essential for development and function of inner ear hair cells in vertebrates. Proc Natl Acad Sci USA 106: 7915–7920.
  Article CAS Google Scholar
• Godwin JG, Ge X, Stephan K, Jurisch A, Tullius SG, Iacomini J . (2010). Identification of a microRNA signature of renal ischemia reperfusion injury. Proc Natl Acad Sci USA 107: 14339–14344.
  Article CAS Google Scholar
• Hayatsu N, Kaneko MK, Mishima K, Nishikawa R, Matsutani M, Price JE et al. (2008). Podocalyxin expression in malignant astrocytic tumors. Biochem Biophys Res Commun 374: 394–398.
  Article CAS Google Scholar
• He L, Hannon GJ . (2004). MicroRNAs: small RNAs with a big role in gene regulation. Nat Rev Genet 5: 522–531.
  Article CAS Google Scholar
• Huang Q, Gumireddy K, Schrier M, le Sage C, Nagel R, Nair S et al. (2008). The microRNAs miR-373 and miR-520c promote tumour invasion and metastasis. Nat Cell Biol 10: 202–210.
  Article CAS Google Scholar
• Ichimi T, Enokida H, Okuno Y, Kunimoto R, Chiyomaru T, Kawamoto K et al. (2009). Identification of novel microRNA targets based on microRNA signatures in bladder cancer. Int J Cancer 125: 345–352.
  Article CAS Google Scholar
• Iorio MV, Visone R, Di Leva G, Donati V, Petrocca F, Casalini P et al. (2007). MicroRNA signatures in human ovarian cancer. Cancer Res 67: 8699–8707.
  Article CAS Google Scholar
• Jones PA, Takai D . (2001). The role of DNA methylation in mammalian epigenetics. Science 293: 1068–1070.
  Article CAS Google Scholar
• Kim S, Lee UJ, Kim MN, Lee EJ, Kim JY, Lee MY et al. (2008). MicroRNA miR-199a* regulates the MET proto-oncogene and the downstream extracellular signal-regulated kinase 2 (ERK2). J Biol Chem 283: 18158–18166.
  Article CAS Google Scholar
• Koch LK, Zhou H, Ellinger J, Biermann K, Holler T, von Rucker A et al. (2008). Stem cell marker expression in small cell lung carcinoma and developing lung tissue. Hum Pathol 39: 1597–1605.
  Article CAS Google Scholar
• Lee DY, Shatseva T, Jeyapalan Z, Du WW, Deng Z, Yang BB . (2009). A 3′-untranslated region (3′UTR) induces organ adhesion by regulating miR-199a* functions. PLoS One 4: e4527.
  Article Google Scholar
• Lee JW, Choi CH, Choi JJ, Park YA, Kim SJ, Hwang SY et al. (2008). Altered MicroRNA expression in cervical carcinomas. Clin Cancer Res 14: 2535–2542.
  Article CAS Google Scholar
• Li LC, Zhao H, Nakajima K, Oh BR, Ribeiro Filho LA, Carroll P et al. (2001). Methylation of the E-cadherin gene promoter correlates with progression of prostate cancer. J Urol 166: 705–709.
  Article CAS Google Scholar
• Li Y, Tabatabai ZL, Lee TL, Hatakeyama S, Ohyama C, Chan WY et al. (2007). The Y-encoded TSPY protein: a significant marker potentially plays a role in the pathogenesis of testicular germ cell tumors. Hum Pathol 38: 1470–1481.
  Article CAS Google Scholar
• Lin EA, Kong L, Bai XH, Luan Y, Liu CJ . (2009). miR-199a, a bone morphogenic protein 2-responsive MicroRNA, regulates chondrogenesis via direct targeting to Smad1. J Biol Chem 284: 11326–11335.
  Article CAS Google Scholar
• Lujambio A, Calin GA, Villanueva A, Ropero S, Sanchez-Cespedes M, Blanco D et al. (2008). A microRNA DNA methylation signature for human cancer metastasis. Proc Natl Acad Sci USA 105: 13556–13561.
  Article CAS Google Scholar
• Nam EJ, Yoon H, Kim SW, Kim H, Kim YT, Kim JH et al. (2008). MicroRNA expression profiles in serous ovarian carcinoma. Clin Cancer Res 14: 2690–2695.
  Article CAS Google Scholar
• Netto GJ, Nakai Y, Nakayama M, Jadallah S, Toubaji A, Nonomura N et al. (2008). Global DNA hypomethylation in intratubular germ cell neoplasia and seminoma, but not in nonseminomatous male germ cell tumors. Mod Pathol 21: 1337–1344.
  Article CAS Google Scholar
• Pang AL, Peacock S, Johnson W, Bear DH, Rennert OM, Chan WY . (2009). Cloning, characterization, and expression analysis of the novel acetyltransferase retrogene Ard1b in the mouse. Biol Reprod 81: 302–309.
  Article CAS Google Scholar
• Peltier HJ, Latham GJ . (2008). Normalization of microRNA expression levels in quantitative RT-PCR assays: identification of suitable reference RNA targets in normal and cancerous human solid tissues. RNA 14: 844–852.
  Article CAS Google Scholar
• Rane S, He M, Sayed D, Vashistha H, Malhotra A, Sadoshima J et al. (2009). Downregulation of miR-199a derepresses hypoxia-inducible factor-1alpha and Sirtuin 1 and recapitulates hypoxia preconditioning in cardiac myocytes. Circ Res 104: 879–886.
  Article CAS Google Scholar
• Sahai E . (2005). Mechanisms of cancer cell invasion. Curr Opin Genet Dev 15: 87–96.
  Article CAS Google Scholar
• Santhakumar D, Forster T, Laqtom NN, Fragkoudis R, Dickinson P, Abreu-Goodger C et al. (2010). Combined agonist-antagonist genome-wide functional screening identifies broadly active antiviral microRNAs. Proc Natl Acad Sci USA 107: 13830–13835.
  Article CAS Google Scholar
• Schopperle WM, Kershaw DB, DeWolf WC . (2003). Human embryonal carcinoma tumor antigen, Gp200/GCTM-2, is podocalyxin. Biochem Biophys Res Commun 300: 285–290.
  Article Google Scholar
• Singal R, Ferris R, Little JA, Wang SZ, Ginder GD . (1997). Methylation of the minimal promoter of an embryonic globin gene silences transcription in primary erythroid cells. Proc Natl Acad Sci USA 94: 13724–13729.
  Article CAS Google Scholar
• Smiraglia DJ, Szymanska J, Kraggerud SM, Lothe RA, Peltomaki P, Plass C . (2002). Distinct epigenetic phenotypes in seminomatous and nonseminomatous testicular germ cell tumors. Oncogene 21: 3909–3916.
  Article CAS Google Scholar
• Somasiri A, Nielsen JS, Makretsov N, McCoy ML, Prentice L, Gilks CB et al. (2004). Overexpression of the anti-adhesin podocalyxin is an independent predictor of breast cancer progression. Cancer Res 64: 5068–5073.
  Article CAS Google Scholar
• Takeda T, Go WY, Orlando RA, Farquhar MG . (2000). Expression of podocalyxin inhibits cell-cell adhesion and modifies junctional properties in Madin-Darby canine kidney cells. Mol Biol Cell 11: 3219–3232.
  Article CAS Google Scholar
• Tsai WC, Hsu PW, Lai TC, Chau GY, Lin CW, Chen CM et al. (2009). MicroRNA-122, a tumor suppressor microRNA that regulates intrahepatic metastasis of hepatocellular carcinoma. Hepatology 49: 1571–1582.
  Article CAS Google Scholar
• Tsai ZY, Singh S, Yu SL, Kao LP, Chen BZ, Ho BC et al. (2010). Identification of microRNAs regulated by activin A in human embryonic stem cells. J Cell Biochem 109: 93–102.
  CAS PubMed Google Scholar
• Ueda T, Volinia S, Okumura H, Shimizu M, Taccioli C, Rossi S et al. (2009). Relation between microRNA expression and progression and prognosis of gastric cancer: a microRNA expression analysis. Lancet Oncol 11: 136–146.
  Article Google Scholar
• Watts GS, Futscher BW, Holtan N, Degeest K, Domann FE, Rose SL . (2008). DNA methylation changes in ovarian cancer are cumulative with disease progression and identify tumor stage. BMC Med Genomics 1: 47.
  Article Google Scholar
• Worley LA, Long MD, Onken MD, Harbour JW . (2008). Micro-RNAs associated with metastasis in uveal melanoma identified by multiplexed microarray profiling. Melanoma Res 18: 184–190.
  Article CAS Google Scholar
• Yin G, Chen R, Alvero AB, Fu HH, Holmberg J, Glackin C et al. (2010). TWISTing stemness, inflammation and proliferation of epithelial ovarian cancer cells through MIR199A2/214. Oncogene 29: 3545–3553.
  Article CAS Google Scholar
• Zhu S, Wu H, Wu F, Nie D, Sheng S, Mo YY . (2008). MicroRNA-21 targets tumor suppressor genes in invasion and metastasis. Cell Res 18: 350–359.
  Article CAS Google Scholar