Heritable gene silencing in Drosophila using double-stranded RNA (original) (raw)
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- Published: August 2000
Nature Biotechnology volume 18, pages 896–898 (2000)Cite this article
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Abstract
RNA-mediated interference (RNAi) is a recently discovered method to determine gene function in a number of organisms, including plants1, nematodes2, Drosophila3,4, zebrafish5, and mice6. Injection of double-stranded RNA (dsRNA) corresponding to a single gene into organisms silences expression of the specific gene2,3,4,5,6. Rapid degradation of mRNA in affected cells blocks gene expression2. Despite the promise of RNAi as a tool for functional genomics, injection of dsRNA interferes with gene expression transiently and is not stably inherited2,3,5,6. Consequently, use of RNAi to study gene function in the late stages of development has been limited. It is particularly problematic for development of disease models that reply on post-natal individuals. To circumvent this problem in Drosophila, we have developed a method to express dsRNA as an extended hairpin-loop RNA. This method has recently been successful in generating RNAi in the nematode Caenorhabditis elegans7. The hairpin RNA is expressed from a transgene exhibiting dyad symmetry in a controlled temporal and spatial pattern. We report that the stably inherited transgene confers specific interference of gene expression in embryos, and tissues that give rise to adult structures such as the wings, legs, eyes, and brain. Thus, RNAi can be adapted to study late-acting gene function in Drosophila. The success of this approach in Drosophila and C. elegans suggests that a similar approach may prove useful to study gene function in higher organisms for which transgenic technology is available.
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References
- Baulcombe, D.C. RNA makes RNA makes no protein. Curr. Biol. 9, R599–R601 (1999).
Article CAS Google Scholar - Montgomery, M.K., Xu, S. & Fire, A. RNA as a target of double-stranded RNA-mediated genetic interference in Caenorhabditis elegans. Proc. Natl. Acad. Sci. USA 95, 15502–15507 (1998).
Article CAS Google Scholar - Kennerdell, J.R. & Carthew, R.W. Use of dsRNA-mediated genetic interference to demonstrate that frizzled and frizzled2 act in the wingless pathway. Cell 95, 1017–1026 (1998).
Article CAS Google Scholar - Misquitta, L. & Paterson, B.M. Targeted disruption of gene function in Drosophila by RNA interference (RNA-i): a role for nautilis in embryonic somatic muscle formation. Proc. Natl. Acad. Sci. USA 96, 1451–1456 (1999).
Article CAS Google Scholar - Li, Y.-X, Farrell, M.J., Liu, R., Mohanty, N. & Kirby, M.L. Double-stranded RNA injection produces null phenotypes in zebrafish. Dev. Biol. 217, 394–405 (2000).
Article CAS Google Scholar - Wianny, F. & Zernicka-Goetz, M. Specific interference with gene function by double-stranded RNA in early mouse development. Nat. Cell Biol. 21, 70–75 (2000).
Article Google Scholar - Tavernarakis, N., Wang, S.L., Dorovkov, M., Ryazanov, A. & Driscoll, M. Heritable and inducible genetic interference by double-stranded RNA encoded by transgenes. Nat. Genet. 24, 180–183 (2000).
Article CAS Google Scholar - Brand, A.H. & Perrimon, N. Targeted gene expression as a means of altering cell fates and generating dominant phenotypes. Development 118, 401–415 (1993).
CAS Google Scholar - Spradling, A.C., & Rubin, G.M. Transposition of cloned P elements into Drosophila germ line chromosomes. Science 218, 341–347 (1982).
Article CAS Google Scholar - Martinek, S. & Young, M.W. Specific genetic interference with behavioural rhythms in Drosophila by expression of inverted repeats. Genetics, in press (2000).
- RNAi In Drosophila Embryos. http://www.pitt.edu/~carthew/manual/RNAi_Protocol.html
- Davison, A. & Leach, D.R. The effects of nucleotide sequence changes on DNA secondary structure formation in Escherichia coli are consistent with cruciform extrusion in vivo. Genetics 137, 361–368 (1994).
CAS PubMed PubMed Central Google Scholar - Ausubel, F.M. et al. Current protocols in molecular biology. (Greene Publishing Assoc., Inc. and John Wiley & Sons, Inc., New York, NY; 1993).
Google Scholar - Hama, C., Ali, Z. & Kornberg, T.B. Region-specific recombination and expression are directed by portions of the Drosophila engrailed promoter. Genes Dev. 4, 1079–1093 (1990).
Article CAS Google Scholar - Wang, Z. & Grabowski, P.J. Cell- and stage-specific splicing events resolved in specialized neurons of the rat cerebellum. RNA 2, 1241–1253 (1996).
CAS PubMed PubMed Central Google Scholar - Foley, K.P., Leonard, M.W. & Engel, J.D. Quantitation of RNA using the polymerase chain reaction. Trends Genet. 9, 380–385 (1993).
Article CAS Google Scholar - Jarman, A.P., Grau, Y., Jan, L.Y. & Jan, Y.N. atonal is a proneural gene that directs chordotonal organ formation in the Drosophila peripheral nervous system. Cell 73, 1307–1321 (1993).
Article CAS Google Scholar - Vincent, J.P., Girdham, C.H., & O'Farrell, P.H. A cell-autonomous, ubiquitous marker for the analysis of Drosophilaw genetic mosaics. Dev. Biol. 164, 328–331 (1994).
Article CAS Google Scholar - Kauffmann, R.C., Li, S., Gallagher, P., Zhang, J. & Carthew, R.W. Ras1 signaling and transcriptional competence in the R7 cell of Drosophila. Genes Dev. 10, 2167–2178 (1996).
Article CAS Google Scholar
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Authors and Affiliations
- Department of Biological Sciences, University of Pittsburgh, 4249 Fifth Avenue, 217 Clapp Hall, Pittsburgh, 15260, PA
Jason R. Kennerdell & Richard W. Carthew
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- Jason R. Kennerdell
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Correspondence toRichard W. Carthew.
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Kennerdell, J., Carthew, R. Heritable gene silencing in Drosophila using double-stranded RNA.Nat Biotechnol 18, 896–898 (2000). https://doi.org/10.1038/78531
- Received: 21 March 2000
- Accepted: 01 June 2000
- Issue Date: August 2000
- DOI: https://doi.org/10.1038/78531