BacArena: Individual-based metabolic modeling of heterogeneous microbes in complex communities (original) (raw)
Fig 2
Runtime of BacArena in relation to the number of added individuals and species.
A Runtime based on an example draft metabolic model (Clostridium sp. SY8519 model taken from [30]) with an increasing number of individuals added to an environment with a dimension of 50 times 50 grid cells. B Runtime based on an increasing number of species (301 draft metabolic models taken from [30]) added to an environment with a dimension of 50 times 50 grid cells and one simulation step. All simulations were run on a windows machine with 32GB of RAM and a 3.5GHz processor with four physical cores.