A Case Study for Large-Scale Human Microbiome Analysis Using JCVI’s Metagenomics Reports (METAREP) (original) (raw)
Figure 1
Screenshot of the METAREP Compare Page.
The Compare page allows users to filter, compare and visualize annotation attributes across multiple datasets. As illustrated in the upper panel, the user can find and select datasets of interest (here pooled body habitats were selected). The middle panel illustrates filter and compare options (here datasets were filtered for the pyruvate dehydrogenase complex and the heatmap plot option was selected). The bottom panel shows the compare results and allows users to switch between annotation attributes and specify its level of granularity (here the taxonomy attribute and phylum level were selected).