Reemergence of Enterovirus 71 Epidemic in Northern Taiwan, 2012 (original) (raw)
Fig 2
Phylogenetic analysis of VP1 gene (A) and full genomes (B) of EV71 virus.
The phylogenetic trees were generated by the neighbor-joining method with 1000 bootstraps for EV71 isolates from this study and other published EV71 strains based on VP1 gene (891bp) and complete genome. Only bootstrap values over 70% were shown. Coxsackievirus A16 was used as the outlier. Sequences of EV71 strains isolated from this study in 2010, 2011 and 2012 were labeled with red, green and blue dots, respectively. A sequence of EV71 isolate from an outpatient in 2010 was labeled with red circle. Sequences of those EV71 strains generated in this study have been submitted to GenBank (accession codes KF154285-KF154347, KF154349-KF154356, KF933353, KP113681-KP113692).