Yersinia pestis strains of ancient phylogenetic branch 0.ANT are widely spread in the high-mountain plague foci of Kyrgyzstan (original) (raw)
Fig 2
Phylogenetic analysis of Yersinia pestis strains from high-mountain foci of Kyrgyzstan based on 2493core SNPs of 37 strains of global origin.
Maximum Likelihood tree is constructed using PHYML 3.1 with the HKY85 model and 500 bootstrap replications. Six Y. pestis genomes from plague foci of Kyrgyzstan and one genome from plague focus of Tajikistan, sequenced in this study, are marked with colored triangles. The names of these strains are circled with colored frames.