AnnoProbe: Annotate the Gene Symbols for Probes in Expression Array (original) (raw)
We curated 147 of expression array, from 3 species(human,mouse,rat), 3 companies('Affymetrix','Illumina','Agilent'), by aligning the 'Fasta' sequences of all probes of each platform to their corresponding reference genome, and then annotate them to genes.
| Version: | 0.1.7 |
|---|---|
| Depends: | R (≥ 3.4.0) |
| Imports: | ggplot2, DT, ggpubr, pheatmap, utils, methods, Biobase, stats, xml2, httr, curl |
| Suggests: | limma, GEOquery, knitr, rmarkdown |
| Published: | 2022-11-14 |
| DOI: | 10.32614/CRAN.package.AnnoProbe |
| Author: | Jianming Zeng [aut], Yujia Xiang [aut], Yonghe Xia [ctb, cre] |
| Maintainer: | Yonghe Xia |
| License: | Apache License (≥ 2) |
| URL: | https://github.com/jmzeng1314/AnnoProbe |
| NeedsCompilation: | no |
| CRAN checks: | AnnoProbe results [issues need fixing before 2024-10-12] |
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