GSEMA: Gene Set Enrichment Meta-Analysis (original) (raw)

Performing the different steps of gene set enrichment meta-analysis. It provides different functions that allow the application of meta-analysis based on the combination of effect sizes from different pathways in different studies to obtain significant pathways that are common to all of them.

Version:

0.99.3

Depends:

R (≥ 4.4)

Imports:

Biobase, limma, Rdpack, singscore, GSVA, progress, pbapply, doParallel, parallel, BiocParallel, metafor, RColorBrewer, pheatmap, methods, scales, plyr, grDevices, stats, impute

Suggests:

BiocStyle, qpdf, BiocGenerics, RUnit, knitr, rmarkdown

Published:

2024-10-14

DOI:

10.32614/CRAN.package.GSEMA

Author:

Juan Antonio Villatoro-García [aut, cre], Pablo Jurado-Bascón [aut], Pedro Carmona-Sáez [aut]

Maintainer:

Juan Antonio Villatoro-García

License:

GPL-2

NeedsCompilation:

no

Materials:

NEWS

In views:

MetaAnalysis

CRAN checks:

GSEMA results