GitHub - SydneyBioX/spicyWorkflow: Perform spatial analysis of in situ cytometry data in R (original) (raw)

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spicyWorkflow

spicyWorkflow provides an overview of how to use our very spicy workflow for performing analysis of highly multiplexed in situ imaging cytometry assays such as IMC, CODEX and MIBI-TOF.

Installation

spicyWorkflow can be installed from GitHub as follows.

install.packages("devtools")

devtools::install_github("SydneyBioX/spicyWorkflow")