Hammer Lab (original) (raw)

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We're a lab working to understand and improve the immune response to cancer

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1. TensorFlow Deconvolution for Microscopy Data
   Jupyter Notebook 89 26
2. Microscopy Image Cytometry Toolkit
   Jupyter Notebook 115 18
3. Keep Track of Experimental Workflows
   OCaml 77 10
4. Library of Stan Models for Survival Analysis
   Jupyter Notebook 123 23
5. Probabilistic HLA typing
   OCaml 35 4
6. Parallel Genomic Analysis Toolkit
   14 4

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Showing 10 of 136 repositories

• SmartCount Public
  Repository for collaboration on Celldom computer vision solutions
  hammerlab/SmartCount’s past year of commit activity
  Jupyter Notebook
  2
  Apache-2.0 0
  17 1
  Updated Aug 2, 2024
• ppx_deriving_cmdliner Public
  Ppx_deriving plugin for generating command line interfaces from types (Cmdliner.Term.t)
  hammerlab/ppx_deriving_cmdliner’s past year of commit activity
  OCaml
  96
  Apache-2.0
  12 12 1
  Updated Sep 12, 2023
• hammerlab/vcf-annotate-polyphen’s past year of commit activity
  Python
  9
  Apache-2.0
  6 2 3
  Updated Dec 26, 2022
• flusso Public
  FCS (Flow Cytometry Standard) parser and utility
  hammerlab/flusso’s past year of commit activity
  JavaScript
  2
  Apache-2.0 0
  3 7
  Updated Dec 9, 2022
• hammerlab/t-cell-relation-extraction’s past year of commit activity
  Jupyter Notebook
  23 5 7 5
  Updated Aug 5, 2022
• cytokit Public
  Microscopy Image Cytometry Toolkit
  hammerlab/cytokit’s past year of commit activity
• flowdec Public
  TensorFlow Deconvolution for Microscopy Data
  hammerlab/flowdec’s past year of commit activity
  Jupyter Notebook
  89
  Apache-2.0
  26 9 2
  Updated Apr 29, 2022
• genspio Public
  Generate Shell Phrases In OCaml
  hammerlab/genspio’s past year of commit activity
  OCaml
  48
  Apache-2.0
  3 16 0
  Updated Dec 15, 2021
• tcr-transfer Public
  Explore an alternative way to clone TILs by first single-cell TCR-seq'ing them and then transforming non-exhausted T cells with these TIL TCRs
  hammerlab/tcr-transfer’s past year of commit activity
  HTML 0 Apache-2.0 0
  6 1
  Updated Nov 30, 2021
• biokepi Public
  Bioinformatics Ketrew Pipelines
  hammerlab/biokepi’s past year of commit activity
  OCaml
  27
  Apache-2.0
  4 85 1
  Updated Nov 14, 2021

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