GitHub - rmflight/categoryCompare: Github repo of the categoryCompare meta-analysis package (original) (raw)

categoryCompare

A Bioconductor package for meta analysis of high-throughput datasets using enriched feature annotations instead of just the features themselves.

See the "Description" file for additional requirements.

Documentation

The Vignette provides a description of the thinking behind this package as well as a toy example for demonstration purposes.

Installation

Installation of this package from Github requires the devtoolspackage.

install.packages("devtools") library(devtools) install_github("categoryCompare", "rmflight")

Alternatively, you can install categoryCompare from Bioconductor itself.

if (!requireNamespace("BiocManager", quietly=TRUE)) install.packages("BiocManager") BiocManager::install("categoryCompare")

Citation

Flight RM, Harrison BJ, Mohammad F, Bunge MB, Moon LDF, Petruska JC and Rouchka EC (2014). .CATEGORYCOMPARE, an analytical tool based on feature annotations.Frontiers in Genetics. link

Bug Reports / Issues

The official development site for categoryCompare is at https://github.com/rmflight/categoryCompare. There you may submit bug-reports / issues / comments to the developer.