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Papers by Carmen Méndez

Research paper thumbnail of Heterologous reconstitution of the biosynthesis pathway for 4-demethyl-premithramycinone, the aglycon of antitumor polyketide mithramycin

Microbial Cell Factories, 2020

Background Mithramycin is an anti-tumor compound of the aureolic acid family produced by Streptom... more Background Mithramycin is an anti-tumor compound of the aureolic acid family produced by Streptomyces argillaceus. Its biosynthesis gene cluster has been cloned and characterized, and several new analogs with improved pharmacological properties have been generated through combinatorial biosynthesis. To further study these compounds as potential new anticancer drugs requires their production yields to be improved significantly. The biosynthesis of mithramycin proceeds through the formation of the key intermediate 4-demethyl-premithramycinone. Extensive studies have characterized the biosynthesis pathway from this intermediate to mithramycin. However, the biosynthesis pathway for 4-demethyl-premithramycinone remains unclear. Results Expression of cosmid cosAR7, containing a set of mithramycin biosynthesis genes, in Streptomyces albus resulted in the production of 4-demethyl-premithramycinone, delimiting genes required for its biosynthesis. Inactivation of mtmL, encoding an ATP-depende...

Research paper thumbnail of {"__content__"=>"Characterization of the Jomthonic Acids Biosynthesis Pathway and Isolation of Novel Analogues in GUA-06-05-006A.", "i"=>{"__content__"=>"Streptomyces caniferus"}}

Marine drugs, Jan 31, 2018

Jomthonic acids (JAs) are a group of natural products (NPs) with adipogenic activity. Structurall... more Jomthonic acids (JAs) are a group of natural products (NPs) with adipogenic activity. Structurally, JAs are formed by a modified β-methylphenylalanine residue, whose biosynthesis involves a methyltransferase that in has been identified as MppJ. Up to date, three JA members (A⁻C) and a few other natural products containing β-methylphenylalanine have been discovered from soil-derived microorganisms. Herein, we report the identification of a gene () coding for a putative methyltransferase highly identical to MppJ in the chromosome of the marine actinobacteria GUA-06-05-006A. In its 5' region, clusters with two polyketide synthases (PKS) (, ), a nonribosomal peptide synthetase (NRPS) () and a thioesterase gene (), possibly conforming a single transcriptional unit. Insertion of a strong constitutive promoter upstream of P1 led to the detection of JA A, along with at least two novel JA family members (D and E). Independent inactivation of , and abolished production of JA A, JA D and J...

Research paper thumbnail of Elucidation of the glycosylation steps during biosynthesis of antitumor macrolides PM100117 and PM100118 and engineering for novel derivatives

Microbial Cell Factories, 2016

Research paper thumbnail of Genome Mining ofStreptomycessp. Tü 6176: Characterization of the Nataxazole Biosynthesis Pathway

Research paper thumbnail of Harnessing Sugar Biosynthesis and Glycosylation to Redesign Natural Products and to Increase Structural Diversity

Natural Products: Discourse, Diversity, and Design, 2014

Research paper thumbnail of Deciphering the late steps in the biosynthesis of the anti-tumour indolocarbazole staurosporine: sugar donor substrate flexibility of the StaG glycosyltransferase

Molecular Microbiology, 2005

Research paper thumbnail of Participation of putative glycoside hydrolases SlgC1 and SlgC2 in the biosynthesis of streptolydigin in Streptomyces lydicus

Microbial Biotechnology, 2012

Research paper thumbnail of The chromomycin CmmA acetyltransferase: a membrane-bound enzyme as a tool for increasing structural diversity of the antitumour mithramycin

Microbial Biotechnology, 2010

Research paper thumbnail of Improving production of bioactive secondary metabolites in actinomycetes by metabolic engineering

Metabolic Engineering, 2008

Production of secondary metabolites is a process influenced by several physico-chemical factors i... more Production of secondary metabolites is a process influenced by several physico-chemical factors including nutrient supply, oxygenation, temperature and pH. These factors have been traditionally controlled and optimized in industrial fermentations in order to enhance metabolite production. In addition, traditional mutagenesis programs have been used by the pharmaceutical industry for strain and production yield improvement. In the last years, the development of recombinant DNA technology has provided new tools for approaching yields improvement by means of genetic manipulation of biosynthetic pathways. These efforts are usually focused in redirecting precursor metabolic fluxes, deregulation of biosynthetic pathways and overexpression of specific enzymes involved in metabolic bottlenecks. In addition, efforts have been made for the heterologous expression of biosynthetic gene clusters in other organisms, looking not only for an increase of production levels but also to speed the process by using rapidly growing and easy to manipulate organisms compared to the producing organism. In this review, we will focus on these genetic approaches as applied to bioactive secondary metabolites produced by actinomycetes.

Research paper thumbnail of Mithramycin Analogues Generated by Combinatorial Biosynthesis Show Improved Bioactivity

Journal of Natural Products, 2008

Research paper thumbnail of Novel compounds produced by Streptomyces lydicus NRRL 2433 engineered mutants altered in the biosynthesis of streptolydigin

The Journal of Antibiotics, 2012

Research paper thumbnail of Characterization of Streptomyces argillaceus genes encoding a polyketide synthase involved in the biosynthesis of the antitumor mithramycin

Gene, 1996

Mithramycin (Mtm) is an aromatic polyketide which shows antibacterial and antitumor activity. Fro... more Mithramycin (Mtm) is an aromatic polyketide which shows antibacterial and antitumor activity. From a chromosomal cosmid library of Streptomyces argillaceus, a Mtm producer, a clone (cosAR7) was isolated by homology to the actI/III region of S. coelicolor and the strDEM genes of S. griseus. From this clone, a 5.3-kb DNA region was sequenced and found to encode six open reading frames (designated as mtmQXPKST1), five of them transcribed in the same direction. The deduced products of five of these genes resembled components of type-II polyketide synthases. The mtm genes would code for an aromatase (mtmQ), a polypeptide of unknown function (mtmX), a beta-ketoacylsynthase (mtmP) and a related 'chain length factor' (mtmK), an acyl carrier protein (mtmS) and a beta-ketoreductase (mtmT1). The involvement of this gene cluster in Mtm biosynthesis was demonstrated by the Mtm non-producing phenotype of mutants generated in two independent insertional inactivation experiments.

Research paper thumbnail of A cytochrome P450-like gene possibly involved in oleandomycin biosynthesis byStreptomyces antibioticus

FEMS Microbiology Letters, 1995

Research paper thumbnail of Insertional inactivation ofmtrXandmtrYgenes from the mithramycin gene cluster affects production and growth of the producer organismStreptomyces argillaceus

FEMS Microbiology Letters, 2000

Research paper thumbnail of Topological studies of the membrane component of the OleC ABC transporter involved in oleandomycin resistance in Streptomyces antibioticus

FEMS Microbiology Letters, 1996

Research paper thumbnail of Oxidative cleavage of premithramycin B is one of the last steps in the biosynthesis of the antitumor drug mithramycin

Chemistry & Biology, 1999

Research paper thumbnail of Deciphering Biosynthesis of the RNA Polymerase Inhibitor Streptolydigin and Generation of Glycosylated Derivatives

Chemistry & Biology, 2009

Research paper thumbnail of Engineering the Biosynthesis of the Polyketide-Nonribosomal Peptide Collismycin A for Generation of Analogs with Neuroprotective Activity

Chemistry & Biology, 2013

Research paper thumbnail of Identification of a sugar flexible glycosyltransferase from Streptomyces olivaceus, the producer of the antitumor polyketide elloramycin

Chemistry & Biology, 2001

Research paper thumbnail of Combining sugar biosynthesis genes for the generation ofl- andd-amicetose and formation of two novel antitumor tetracenomycins

Research paper thumbnail of Heterologous reconstitution of the biosynthesis pathway for 4-demethyl-premithramycinone, the aglycon of antitumor polyketide mithramycin

Microbial Cell Factories, 2020

Background Mithramycin is an anti-tumor compound of the aureolic acid family produced by Streptom... more Background Mithramycin is an anti-tumor compound of the aureolic acid family produced by Streptomyces argillaceus. Its biosynthesis gene cluster has been cloned and characterized, and several new analogs with improved pharmacological properties have been generated through combinatorial biosynthesis. To further study these compounds as potential new anticancer drugs requires their production yields to be improved significantly. The biosynthesis of mithramycin proceeds through the formation of the key intermediate 4-demethyl-premithramycinone. Extensive studies have characterized the biosynthesis pathway from this intermediate to mithramycin. However, the biosynthesis pathway for 4-demethyl-premithramycinone remains unclear. Results Expression of cosmid cosAR7, containing a set of mithramycin biosynthesis genes, in Streptomyces albus resulted in the production of 4-demethyl-premithramycinone, delimiting genes required for its biosynthesis. Inactivation of mtmL, encoding an ATP-depende...

Research paper thumbnail of {"__content__"=>"Characterization of the Jomthonic Acids Biosynthesis Pathway and Isolation of Novel Analogues in GUA-06-05-006A.", "i"=>{"__content__"=>"Streptomyces caniferus"}}

Marine drugs, Jan 31, 2018

Jomthonic acids (JAs) are a group of natural products (NPs) with adipogenic activity. Structurall... more Jomthonic acids (JAs) are a group of natural products (NPs) with adipogenic activity. Structurally, JAs are formed by a modified β-methylphenylalanine residue, whose biosynthesis involves a methyltransferase that in has been identified as MppJ. Up to date, three JA members (A⁻C) and a few other natural products containing β-methylphenylalanine have been discovered from soil-derived microorganisms. Herein, we report the identification of a gene () coding for a putative methyltransferase highly identical to MppJ in the chromosome of the marine actinobacteria GUA-06-05-006A. In its 5' region, clusters with two polyketide synthases (PKS) (, ), a nonribosomal peptide synthetase (NRPS) () and a thioesterase gene (), possibly conforming a single transcriptional unit. Insertion of a strong constitutive promoter upstream of P1 led to the detection of JA A, along with at least two novel JA family members (D and E). Independent inactivation of , and abolished production of JA A, JA D and J...

Research paper thumbnail of Elucidation of the glycosylation steps during biosynthesis of antitumor macrolides PM100117 and PM100118 and engineering for novel derivatives

Microbial Cell Factories, 2016

Research paper thumbnail of Genome Mining ofStreptomycessp. Tü 6176: Characterization of the Nataxazole Biosynthesis Pathway

Research paper thumbnail of Harnessing Sugar Biosynthesis and Glycosylation to Redesign Natural Products and to Increase Structural Diversity

Natural Products: Discourse, Diversity, and Design, 2014

Research paper thumbnail of Deciphering the late steps in the biosynthesis of the anti-tumour indolocarbazole staurosporine: sugar donor substrate flexibility of the StaG glycosyltransferase

Molecular Microbiology, 2005

Research paper thumbnail of Participation of putative glycoside hydrolases SlgC1 and SlgC2 in the biosynthesis of streptolydigin in Streptomyces lydicus

Microbial Biotechnology, 2012

Research paper thumbnail of The chromomycin CmmA acetyltransferase: a membrane-bound enzyme as a tool for increasing structural diversity of the antitumour mithramycin

Microbial Biotechnology, 2010

Research paper thumbnail of Improving production of bioactive secondary metabolites in actinomycetes by metabolic engineering

Metabolic Engineering, 2008

Production of secondary metabolites is a process influenced by several physico-chemical factors i... more Production of secondary metabolites is a process influenced by several physico-chemical factors including nutrient supply, oxygenation, temperature and pH. These factors have been traditionally controlled and optimized in industrial fermentations in order to enhance metabolite production. In addition, traditional mutagenesis programs have been used by the pharmaceutical industry for strain and production yield improvement. In the last years, the development of recombinant DNA technology has provided new tools for approaching yields improvement by means of genetic manipulation of biosynthetic pathways. These efforts are usually focused in redirecting precursor metabolic fluxes, deregulation of biosynthetic pathways and overexpression of specific enzymes involved in metabolic bottlenecks. In addition, efforts have been made for the heterologous expression of biosynthetic gene clusters in other organisms, looking not only for an increase of production levels but also to speed the process by using rapidly growing and easy to manipulate organisms compared to the producing organism. In this review, we will focus on these genetic approaches as applied to bioactive secondary metabolites produced by actinomycetes.

Research paper thumbnail of Mithramycin Analogues Generated by Combinatorial Biosynthesis Show Improved Bioactivity

Journal of Natural Products, 2008

Research paper thumbnail of Novel compounds produced by Streptomyces lydicus NRRL 2433 engineered mutants altered in the biosynthesis of streptolydigin

The Journal of Antibiotics, 2012

Research paper thumbnail of Characterization of Streptomyces argillaceus genes encoding a polyketide synthase involved in the biosynthesis of the antitumor mithramycin

Gene, 1996

Mithramycin (Mtm) is an aromatic polyketide which shows antibacterial and antitumor activity. Fro... more Mithramycin (Mtm) is an aromatic polyketide which shows antibacterial and antitumor activity. From a chromosomal cosmid library of Streptomyces argillaceus, a Mtm producer, a clone (cosAR7) was isolated by homology to the actI/III region of S. coelicolor and the strDEM genes of S. griseus. From this clone, a 5.3-kb DNA region was sequenced and found to encode six open reading frames (designated as mtmQXPKST1), five of them transcribed in the same direction. The deduced products of five of these genes resembled components of type-II polyketide synthases. The mtm genes would code for an aromatase (mtmQ), a polypeptide of unknown function (mtmX), a beta-ketoacylsynthase (mtmP) and a related 'chain length factor' (mtmK), an acyl carrier protein (mtmS) and a beta-ketoreductase (mtmT1). The involvement of this gene cluster in Mtm biosynthesis was demonstrated by the Mtm non-producing phenotype of mutants generated in two independent insertional inactivation experiments.

Research paper thumbnail of A cytochrome P450-like gene possibly involved in oleandomycin biosynthesis byStreptomyces antibioticus

FEMS Microbiology Letters, 1995

Research paper thumbnail of Insertional inactivation ofmtrXandmtrYgenes from the mithramycin gene cluster affects production and growth of the producer organismStreptomyces argillaceus

FEMS Microbiology Letters, 2000

Research paper thumbnail of Topological studies of the membrane component of the OleC ABC transporter involved in oleandomycin resistance in Streptomyces antibioticus

FEMS Microbiology Letters, 1996

Research paper thumbnail of Oxidative cleavage of premithramycin B is one of the last steps in the biosynthesis of the antitumor drug mithramycin

Chemistry & Biology, 1999

Research paper thumbnail of Deciphering Biosynthesis of the RNA Polymerase Inhibitor Streptolydigin and Generation of Glycosylated Derivatives

Chemistry & Biology, 2009

Research paper thumbnail of Engineering the Biosynthesis of the Polyketide-Nonribosomal Peptide Collismycin A for Generation of Analogs with Neuroprotective Activity

Chemistry & Biology, 2013

Research paper thumbnail of Identification of a sugar flexible glycosyltransferase from Streptomyces olivaceus, the producer of the antitumor polyketide elloramycin

Chemistry & Biology, 2001

Research paper thumbnail of Combining sugar biosynthesis genes for the generation ofl- andd-amicetose and formation of two novel antitumor tetracenomycins

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