Ontobee: OBIB (original) (raw)

Ontology for Biobanking

Ontology: OBIB

• IRI: http://purl.obolibrary.org/obo/obib.owl
• OBO Foundry: Library
• Download: http://purl.obolibrary.org/obo/obib.owl
• Home: https://github.com/biobanking/biobanking
• Documentation:
• Contact: Justin Whorton
• Description: An ontology built for annotation and modeling of biobank repository and biobanking administration

Annotations

• contributor: Chris Stoeckert, Jie Zheng, Mathias Brochhausen, William R. Hogan, Alice Nzinga, Jan-Eric Litton, Loreana Norlin, Maria Anderberg, Martin N. Fransson, Mikael Eriksson, Roxana Merino-Martinez, Sanela Kjellqvist

• description: The Ontology for Biobanking (OBIB) is an ontology for the annotation and modeling of the activities, contents, and administration of a biobank. Biobanks are facilities that store specimens, such as bodily fluids and tissues, typically along with specimen annotation and clinical data. OBIB is based on a subset of the Ontology for Biomedical Investigation (OBI), has the Basic Formal Ontology (BFO) as its upper ontology, and is developed following OBO Foundry principles. The first version of OBIB resulted from the merging of two existing biobank-related ontologies, OMIABIS and biobank ontology.

• title: Ontology for BIoBanking (OBIB)

• versionIRI: http://purl.obolibrary.org/obo/obib/2023-04-05/obib.owl

• versionInfo: 2023-04-05

• license: http://creativecommons.org/licenses/by/4.0/

• source: MIABIS_v2_accepted and UPenn Biobank ontology

• Class (1803)

• ObjectProperty (92)

• DatatypeProperty (3)

• AnnotationProperty (77)

• Instance (226)

Top level terms and selected core

terms

• biobank
• biobank organization
• entity
• informed consent form
• specimen

Number of SPARQL queries:8