Victoria Deleray • UCSD Profiles (original) (raw)
- Structure-centric searching enables global mapping of the public metabolome. Nat Biotechnol. 2026 Apr 15. El Abiead Y, Seo JI, Charron-Lamoureux V, Strobel M, Gonçalves Nunes WD, Zhao HN, Kvitne KE, Zuffa S, Mannochio-Russo H, Gouda H, Bez C, Patan A, Xing S, Zemlin J, Mohany I, Agongo J, Caraballo Rodriguez AM, Burnett LA, Deleray V, Pakkir Shah AK, Kalinski JC, Petras D, Alygizakis N, Carver J, Yurekten O, Payne T, Fahy E, Subramaniam S, Vizcaíno JA, Wang M, Dorrestein PC. PMID: 41986697.
View in: PubMed Mentions: - Antibiotic Exposure Through Human Milk Influences the Infant Gut Microbiome. bioRxiv. 2026 Apr 01. Kvitne KE, Zuffa S, Charron-Lamoureux V, Patan A, Agongo J, Cai J, Deleray V, El Abiead Y, Xing S, Zemlin J, Thomas S, Nelson MR, Gant A, Ghadishah A, Lam A, Ho B, Momper JD, Suhandynata RT, Bertrand K, Knight R, Chambers C, Dorrestein PC, Tsunoda SM. PMID: 41959458; PMCID: PMC13060235.
View in: PubMed Mentions: - Pan-Metabolomics Repository Mapping of the Carnitine Landscape. bioRxiv. 2026 Mar 31. Mannochio-Russo H, Ferreira PC, Kvitne KE, Patan A, Deleray V, Agongo J, Gouda H, Gonçalves Nunes WD, Xing S, Zemlin J, van Faassen M, Reilly ER, Koo I, Patterson AD, Tsunoda SM, Wang M, Siegel D, Burnett LA, Dorrestein PC. PMID: 41959195; PMCID: PMC13060134.
View in: PubMed Mentions: - Unlocking the Bile Acid Universe: Advanced Workflows and a Multidimensional Library of 280 Unique Species. bioRxiv. 2026 Feb 19. Zhang G, Vincent EC, Disselkoen SM, Dodds JN, DuVal-Smith Q, Patan A, Mohanty I, Deleray V, Zhang J, Thiessen PA, Bolton EE, Schymanski EL, Dorrestein PC, Theriot CM, Baker ES. PMID: 41756824; PMCID: PMC12934720.
View in: PubMed Mentions: - A searchable metadata network graph for microbiome metabolomics. bioRxiv. 2026 Feb 05. Charron-Lamoureux V, Xing S, Patan A, Walker C, Monter RA, Abiead YE, Zhao HN, Patel L, Weng Y, Gonzalez A, Ackermann G, Deleray V, Gandhi V, Mohanty I, Caraballo-Rodriguez AM, Kvitne KE, Zuffa S, Norman A, Martin A, Chin L, Paz-Gonzalez R, Sala-Climent M, Suryawinata N, Zemlin J, Gouda H, Hu Z, Norton G, Rajkumar P, Molina AJ, Bergstrom J, Pinner M, Giddings S, Aron AT, Liang L, Dahesh S, Lamichhane S, Reilly ER, Nizet V, Skrip A, Lukowski AL, Shore SFH, Ghoshal S, Engevik MA, Horvath TD, Renwick S, Agongo J, Marco ML, Mazmanian SK, Wang M, Yang H, McDonald D, Guma M, Stegmann E, Hernandez Perez N, Stincone P, Kemen E, Pakkir Shah AK, Bode L, Petras D, Siegel D, Raffatellu M, Patterson AD, Devkota S, Jinich A, Knight R, Zengler K, Dorrestein PC. PMID: 41676651; PMCID: PMC12889665.
View in: PubMed Mentions: - Retrieval-Augmented Language Models Enable Scalable Chemical Source Classification in Metabolomics Workflows. Anal Chem. 2026 Feb 10; 98(5):3474-3484. Rajkumar P, Tang R, Sapre H, Zemlin J, Deleray V, Seo JI, Mohan S, Xing S, Gouda H, El Abiead Y, Tsunoda SM, Zhao HN, Dorrestein PC. PMID: 41610168; PMCID: PMC12903069.
View in: PubMed Mentions: Fields:
Translation:HumansAnimals - Community Curation of Microbial Metabolites Enables Biological Insights of Metabolomics Data. bioRxiv. 2026 Jan 26. Mannochio-Russo H, Gonçalves Nunes WD, Xing S, de Oliveira F, Caraballo-Rodríguez AM, Gomes PWP, Charron-Lamoureux V, Agongo J, Avalon NE, Bui T, Cancelada L, Chevrette MG, Cumsille A, de Araújo MB, De Graeve M, Deleray V, Donia MS, Dzveta MB, El Abiead Y, Ellis RJ, Franklin D, Garg N, Gouda H, Djande CYH, Hiskia A, Ho BN, Hughes CC, Hwang S, Iliakopoulou S, Iudicello JE, Jarmusch AK, Kaloudis T, Koester I, Konkel R, Koolen HHF, Kvitne KE, La Rosa SL, Lam A, Lamichhane S, Lephatsi M, Letendre S, Magyari S, Mazur-Marzec H, McDonald D, Mohanty I, Monge-Loría M, Moore DJ, Veiga TAM, Mulaudzi MS, Nephali L, Nguyen G, Orságh M, Patan A, Pluskal T, Pope PB, de Medeiros LS, Stincone P, Tekel A, Thomas S, Torres RR, Tsunoda SM, Tugizimana F, van Faassen M, Vasquez-Castro F, Vitale GA, Wagner BC, Wang CX, Zervou SK, Zhao HN, Zuffa S, Petras D, McCall LI, Knight R, Wang M, Dorrestein PC. PMID: 41659575; PMCID: PMC12874021.
View in: PubMed Mentions: - Synthesis-driven reverse metabolomics reveals 3-hydroxy N-acyl amides as gut microbial molecules. bioRxiv. 2026 Jan 08. Deleray V, Charron-Lamoureux V, Vittali K, Mannochio-Russo H, Wang CX, Walker C, Zengler K, Siegel D, Dorrestein PC. PMID: 41542415; PMCID: PMC12803199.
View in: PubMed Mentions: - Effect of Perinatal Ampicillin or Amoxicillin/Clavulanate Exposure on Maternal and Infant Gut Microbiome, Metabolome, and Infant Responses to the 20-valent Pneumococcal Conjugate Vaccine. bioRxiv. 2025 Dec 08. Suzuki E, Deleray V, Zemlin J, Kousha A, Nonoguchi H, Sun D, Tsai CM, Zuffa S, Kvitne KE, Dorrestein PC, Tsunoda SM, Nizet V, Liu GY, Askarian F. PMID: 41427374; PMCID: PMC12713748.
View in: PubMed Mentions: - Charting the Undiscovered Metabolome with Synthetic Multiplexing. bioRxiv. 2025 Nov 19. Patan A, Xing S, Charron-Lamoureux V, Hu Z, Deleray V, Agongo J, El Abiead Y, Mannochio-Russo H, Mohanty I, Gouda H, Zemlin J, Rajkumar P, Lee C, Leanos D, Weimann N, Tsuda W, Giddings S, Bui T, Kvitne KE, Zhao HN, Zuffa S, Nguyen V, Andrade A, Gonçalves Nunes WD, Caraballo-Rodríguez AM, Caetano David L, Carver J, Bandeira N, Wang M, Burnett LA, Siegel D, Dorrestein PC. PMID: 41332743; PMCID: PMC12667992.
View in: PubMed Mentions: - Molecules to medicine: advances in metabolomics for natural product drug discovery. Curr Opin Biotechnol. 2025 Dec; 96:103373. Deleray V, Dorrestein PC, Avalon NE. PMID: 41175606.
View in: PubMed Mentions: 1 Fields:
Translation:Humans - Learning molecular fingerprints of foods to decode dietary intake. Res Sq. 2025 Oct 15. Dorrestein P, Gouda H, Agongo J, Kelly P, Sala-Climent M, Nunes WG, Gkikas K, Xing S, Deleray V, Wang C, Charron-Lamoureux V, Zhao HN, Mohanty I, McMaugh A, Sharma M, Nguyen A, Fleming J, Wang M, Rattray N, Russell R, Gerasimidis K, Guma M. PMID: 41282223; PMCID: PMC12633204.
View in: PubMed Mentions: - Influence of perinatal ampicillin exposure on maternal fecal microbial and metabolic profiles. bioRxiv. 2025 Jun 30. Zuffa S, Thomas SP, Mohanty I, El Abiead Y, Deleray V, Kvitne KE, Kousha A, Suzuki E, Tsai CM, Nguyen G, Ho B, Liu GY, Nizet V, Dorrestein PC, Askarian F, Tsunoda SM. PMID: 40631287; PMCID: PMC12236745.
View in: PubMed Mentions: - The microbiome diversifies long- to short-chain fatty acid-derived N-acyl lipids. Cell. 2025 Jul 24; 188(15):4154-4169.e19. Mannochio-Russo H, Charron-Lamoureux V, van Faassen M, Lamichhane S, Gonçalves Nunes WD, Deleray V, Ayala AV, Tanaka Y, Patan A, Vittali K, Rajkumar P, El Abiead Y, Zhao HN, Gomes PWP, Mohanty I, Lee C, Sund A, Sharma M, Liu Y, Pattynama D, Walker GT, Norton GJ, Khatib L, Andalibi MS, Wang CX, Ellis RJ, Moore DJ, Iudicello JE, Franklin D, Letendre S, Chin L, Walker C, Renwick S, Zemlin J, Meehan MJ, Song X, Kasper D, Burcham Z, Kim JJ, Kadakia S, Raffatellu M, Bode L, Chu H, Zengler K, Wang M, Siegel D, Knight R, Dorrestein PC. PMID: 40499541; PMCID: PMC12428309.
View in: PubMed Mentions: 6 Fields:
Translation:Humans - Enabling pan-repository reanalysis for big data science of public metabolomics data. Nat Commun. 2025 May 24; 16(1):4838. El Abiead Y, Strobel M, Payne T, Fahy E, O'Donovan C, Subramamiam S, Vizcaíno JA, Yurekten O, Deleray V, Zuffa S, Xing S, Mannochio-Russo H, Mohanty I, Zhao HN, Caraballo-Rodriguez AM, P Gomes PW, Avalon NE, Northen TR, Bowen BP, Louie KB, Dorrestein PC, Wang M. PMID: 40413169; PMCID: PMC12103507.
View in: PubMed Mentions: 12 Fields:
Translation:Humans - A guide to reverse metabolomics-a framework for big data discovery strategy. Nat Protoc. 2025 Oct; 20(10):2960-2993. Charron-Lamoureux V, Mannochio-Russo H, Lamichhane S, Xing S, Patan A, Portal Gomes PW, Rajkumar P, Deleray V, Caraballo-Rodríguez AM, Chua KV, Lee LS, Liu Z, Ching J, Wang M, Dorrestein PC. PMID: 40021805; PMCID: PMC12353464.
View in: PubMed Mentions: 4 Fields:
Translation:HumansAnimals - The microbiome diversifies N-acyl lipid pools - including short-chain fatty acid-derived compounds. bioRxiv. 2024 Nov 02. Mannochio-Russo H, Charron-Lamoureux V, van Faassen M, Lamichhane S, Nunes WDG, Deleray V, Patan A, Vittali K, Rajkumar P, El Abiead Y, Zhao HN, Gomes PWP, Mohanty I, Lee C, Sund A, Sharma M, Liu Y, Pattynama D, Walker GT, Norton GJ, Khatib L, Andalibi MS, Wang CX, Ellis RJ, Moore DJ, Iudicello JE, Franklin D, Letendre S, Chin L, Walker C, Renwick S, Zemlin J, Meehan MJ, Song X, Kasper D, Burcham Z, Kim JJ, Kadakia S, Raffatellu M, Bode L, Zengler K, Wang M, Siegel D, Knight R, Dorrestein PC. PMID: 39554097; PMCID: PMC11565975.
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This graph shows the number and percent of publications by field. Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications. Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written. To see the data as text, click here.
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