Genetic analysis of the isc operon in Escherichia coli involved in the biogenesis of cellular iron-sulfur proteins - PubMed (original) (raw)
Genetic analysis of the isc operon in Escherichia coli involved in the biogenesis of cellular iron-sulfur proteins
U Tokumoto et al. J Biochem. 2001 Jul.
Free article
Abstract
The iron-sulfur (Fe-S) cluster, the nonheme-iron cofactor essential for the activity of many proteins, is incorporated into target proteins with the aid of complex machinery. In bacteria, several proteins encoded by the iscRSUA-hscBA-fdx-ORF3 cluster (isc operon) have been proposed to execute crucial tasks in the assembly of Fe-S clusters. To elucidate the in vivo function, we have undertaken a systematic mutational analysis of the genes in the Escherichia coli isc operon. In all functional tests, i.e. growth rate, nutritional requirements and activities of Fe-S enzymes, the inactivation of the iscS gene elicited the most drastic alteration. Strains with mutations in the iscU, hscB, hscA, and fdx genes also exhibited conspicuous phenotypical consequences almost identical to one another. The effect of the inactivation of iscA was small but appreciable on Fe-S enzymes. In contrast, mutants with inactivated iscR or ORF3 showed virtually no differences from wild-type cells. The requirement of iscSUA-hscBA-fdx for the assembly of Fe-S clusters was further confirmed by complementation experiments using a mutant strain in which the entire isc operon was deleted. Our findings support the conclusion that IscS, via cysteine desulfurase activity, provides the sulfur that is subsequently incorporated into Fe-S clusters by assembler machinery comprising of the iscUA-hscBA-fdx gene products. The results presented here indicate crucial roles for IscU, HscB, HscA, and Fdx as central components of the assembler machinery and also provide evidence for interactions among them.
Similar articles
- Functional assignment of the ORF2-iscS-iscU-iscA-hscB-hscA-fdx-ORF3 gene cluster involved in the assembly of Fe-S clusters in Escherichia coli.
Takahashi Y, Nakamura M. Takahashi Y, et al. J Biochem. 1999 Nov;126(5):917-26. doi: 10.1093/oxfordjournals.jbchem.a022535. J Biochem. 1999. PMID: 10544286 - Assembly of iron-sulfur clusters. Identification of an iscSUA-hscBA-fdx gene cluster from Azotobacter vinelandii.
Zheng L, Cash VL, Flint DH, Dean DR. Zheng L, et al. J Biol Chem. 1998 May 22;273(21):13264-72. doi: 10.1074/jbc.273.21.13264. J Biol Chem. 1998. PMID: 9582371 - Network of protein-protein interactions among iron-sulfur cluster assembly proteins in Escherichia coli.
Tokumoto U, Nomura S, Minami Y, Mihara H, Kato S, Kurihara T, Esaki N, Kanazawa H, Matsubara H, Takahashi Y. Tokumoto U, et al. J Biochem. 2002 May;131(5):713-9. doi: 10.1093/oxfordjournals.jbchem.a003156. J Biochem. 2002. PMID: 11983079 - Tangled web of interactions among proteins involved in iron-sulfur cluster assembly as unraveled by NMR, SAXS, chemical crosslinking, and functional studies.
Kim JH, Bothe JR, Alderson TR, Markley JL. Kim JH, et al. Biochim Biophys Acta. 2015 Jun;1853(6):1416-28. doi: 10.1016/j.bbamcr.2014.11.020. Epub 2014 Nov 22. Biochim Biophys Acta. 2015. PMID: 25450980 Free PMC article. Review. - Assembly of Fe/S proteins in bacterial systems: Biochemistry of the bacterial ISC system.
Blanc B, Gerez C, Ollagnier de Choudens S. Blanc B, et al. Biochim Biophys Acta. 2015 Jun;1853(6):1436-47. doi: 10.1016/j.bbamcr.2014.12.009. Epub 2014 Dec 13. Biochim Biophys Acta. 2015. PMID: 25510311 Review.
Cited by
- Structure and function of plant-type ferredoxins.
Fukuyama K. Fukuyama K. Photosynth Res. 2004;81(3):289-301. doi: 10.1023/B:PRES.0000036882.19322.0a. Photosynth Res. 2004. PMID: 16034533 - Cys-328 of IscS and Cys-63 of IscU are the sites of disulfide bridge formation in a covalently bound IscS/IscU complex: implications for the mechanism of iron-sulfur cluster assembly.
Kato S, Mihara H, Kurihara T, Takahashi Y, Tokumoto U, Yoshimura T, Esaki N. Kato S, et al. Proc Natl Acad Sci U S A. 2002 Apr 30;99(9):5948-52. doi: 10.1073/pnas.082123599. Epub 2002 Apr 23. Proc Natl Acad Sci U S A. 2002. PMID: 11972033 Free PMC article. - Characterization of iron binding in IscA, an ancient iron-sulphur cluster assembly protein.
Ding H, Clark RJ. Ding H, et al. Biochem J. 2004 Apr 15;379(Pt 2):433-40. doi: 10.1042/BJ20031702. Biochem J. 2004. PMID: 14720122 Free PMC article. - High-Throughput Proteomics Identifies Proteins With Importance to Postantibiotic Recovery in Depolarized Persister Cells.
Spanka DT, Konzer A, Edelmann D, Berghoff BA. Spanka DT, et al. Front Microbiol. 2019 Mar 6;10:378. doi: 10.3389/fmicb.2019.00378. eCollection 2019. Front Microbiol. 2019. PMID: 30894840 Free PMC article. - Inferring the relation between transcriptional and posttranscriptional regulation from expression compendia.
Ishchukov I, Wu Y, Van Puyvelde S, Vanderleyden J, Marchal K. Ishchukov I, et al. BMC Microbiol. 2014 Jan 27;14:14. doi: 10.1186/1471-2180-14-14. BMC Microbiol. 2014. PMID: 24467879 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases
Miscellaneous