Crystal structure of a Src-homology 3 (SH3) domain - PubMed (original) (raw)
. 1992 Oct 29;359(6398):851-5.
doi: 10.1038/359851a0.
Affiliations
- PMID: 1279434
- DOI: 10.1038/359851a0
Crystal structure of a Src-homology 3 (SH3) domain
A Musacchio et al. Nature. 1992.
Abstract
The Src-homologous SH3 domain is a small domain present in a large number of proteins that are involved in signal transduction, such as the Src protein tyrosine kinase, or in membrane-cytoskeleton interactions, but the function of SH3 is still unknown (reviewed in refs 1-3). Here we report the three-dimensional structure at 1.8 A resolution of the SH3 domain of the cytoskeletal protein spectrin expressed in Escherichia coli. The domain is a compact beta-barrel made of five antiparallel beta-strands. The amino acids that are conserved in the SH3 sequences are located close to each other on one side of the molecule. This surface is rich in aromatic and carboxylic amino acids, and is distal to the region of the molecule where the N and C termini reside and where SH3 inserts into the alpha-spectrin chain. We suggest that a protein ligand binds to this conserved surface of SH3.
Comment in
- Jury returns on structure prediction.
Rost B, Sander C. Rost B, et al. Nature. 1992 Dec 10;360(6404):540. doi: 10.1038/360540b0. Nature. 1992. PMID: 1281284 No abstract available.
Similar articles
- Structure of the regulatory domains of the Src-family tyrosine kinase Lck.
Eck MJ, Atwell SK, Shoelson SE, Harrison SC. Eck MJ, et al. Nature. 1994 Apr 21;368(6473):764-9. doi: 10.1038/368764a0. Nature. 1994. PMID: 7512222 - Crystal structure of the SH3 domain in human Fyn; comparison of the three-dimensional structures of SH3 domains in tyrosine kinases and spectrin.
Noble ME, Musacchio A, Saraste M, Courtneidge SA, Wierenga RK. Noble ME, et al. EMBO J. 1993 Jul;12(7):2617-24. doi: 10.2210/pdb1shf/pdb. EMBO J. 1993. PMID: 7687536 Free PMC article. - Role of native topology investigated by multiple unfolding simulations of four SH3 domains.
Gsponer J, Caflisch A. Gsponer J, et al. J Mol Biol. 2001 May 25;309(1):285-98. doi: 10.1006/jmbi.2001.4552. J Mol Biol. 2001. PMID: 11491296 - SH3--an abundant protein domain in search of a function.
Musacchio A, Gibson T, Lehto VP, Saraste M. Musacchio A, et al. FEBS Lett. 1992 Jul 27;307(1):55-61. doi: 10.1016/0014-5793(92)80901-r. FEBS Lett. 1992. PMID: 1639195 Review. - Closing in on SH2 specificity.
Birge RB, Hanafusa H. Birge RB, et al. Science. 1993 Dec 3;262(5139):1522-4. doi: 10.1126/science.7504323. Science. 1993. PMID: 7504323 Review. No abstract available.
Cited by
- Structural Determinants of Misfolding in Multidomain Proteins.
Tian P, Best RB. Tian P, et al. PLoS Comput Biol. 2016 May 10;12(5):e1004933. doi: 10.1371/journal.pcbi.1004933. eCollection 2016 May. PLoS Comput Biol. 2016. PMID: 27163669 Free PMC article. - The Physiological Molecular Shape of Spectrin: A Compact Supercoil Resembling a Chinese Finger Trap.
Brown JW, Bullitt E, Sriswasdi S, Harper S, Speicher DW, McKnight CJ. Brown JW, et al. PLoS Comput Biol. 2015 Jun 11;11(6):e1004302. doi: 10.1371/journal.pcbi.1004302. eCollection 2015 Jun. PLoS Comput Biol. 2015. PMID: 26067675 Free PMC article. - Solvation in protein folding analysis: combination of theoretical and experimental approaches.
Fernández-Escamilla AM, Cheung MS, Vega MC, Wilmanns M, Onuchic JN, Serrano L. Fernández-Escamilla AM, et al. Proc Natl Acad Sci U S A. 2004 Mar 2;101(9):2834-9. doi: 10.1073/pnas.0304180101. Epub 2004 Feb 20. Proc Natl Acad Sci U S A. 2004. PMID: 14978284 Free PMC article. - The amyloid stretch hypothesis: recruiting proteins toward the dark side.
Esteras-Chopo A, Serrano L, López de la Paz M. Esteras-Chopo A, et al. Proc Natl Acad Sci U S A. 2005 Nov 15;102(46):16672-7. doi: 10.1073/pnas.0505905102. Epub 2005 Nov 1. Proc Natl Acad Sci U S A. 2005. PMID: 16263932 Free PMC article. - Determinants of the SRC homology domain 3-like fold.
D'Aquino JA, Ringe D. D'Aquino JA, et al. J Bacteriol. 2003 Jul;185(14):4081-6. doi: 10.1128/JB.185.14.4081-4086.2003. J Bacteriol. 2003. PMID: 12837782 Free PMC article.
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases
Miscellaneous