Method of the Year: spatially resolved transcriptomics - PubMed (original) (raw)
Method of the Year: spatially resolved transcriptomics
Vivien Marx. Nat Methods. 2021 Jan.
Erratum in
- Publisher Correction: Method of the Year: spatially resolved transcriptomics.
Marx V. Marx V. Nat Methods. 2021 Feb;18(2):219. doi: 10.1038/s41592-021-01065-y. Nat Methods. 2021. PMID: 33462506 No abstract available.
No abstract available
Similar articles
- Spatially resolved transcriptomics in neuroscience.
Close JL, Long BR, Zeng H. Close JL, et al. Nat Methods. 2021 Jan;18(1):23-25. doi: 10.1038/s41592-020-01040-z. Nat Methods. 2021. PMID: 33408398 No abstract available. - Spatially resolved transcriptomics adds a new dimension to genomics.
Larsson L, Frisén J, Lundeberg J. Larsson L, et al. Nat Methods. 2021 Jan;18(1):15-18. doi: 10.1038/s41592-020-01038-7. Nat Methods. 2021. PMID: 33408402 No abstract available. - Method of the Year 2020: spatially resolved transcriptomics.
[No authors listed] [No authors listed] Nat Methods. 2021 Jan;18(1):1. doi: 10.1038/s41592-020-01042-x. Nat Methods. 2021. PMID: 33408396 No abstract available. - Spatially resolved transcriptomics and beyond.
Crosetto N, Bienko M, van Oudenaarden A. Crosetto N, et al. Nat Rev Genet. 2015 Jan;16(1):57-66. doi: 10.1038/nrg3832. Epub 2014 Dec 2. Nat Rev Genet. 2015. PMID: 25446315 Review. - Mapping Cellular Coordinates through Advances in Spatial Transcriptomics Technology.
Teves JM, Won KJ. Teves JM, et al. Mol Cells. 2020 Jul 31;43(7):591-599. doi: 10.14348/molcells.2020.0020. Mol Cells. 2020. PMID: 32507771 Free PMC article. Review.
Cited by
- Characterization of regeneration initiating cells during Xenopus laevis tail regeneration.
Sindelka R, Naraine R, Abaffy P, Zucha D, Kraus D, Netusil J, Smetana K Jr, Lacina L, Endaya BB, Neuzil J, Psenicka M, Kubista M. Sindelka R, et al. Genome Biol. 2024 Oct 1;25(1):251. doi: 10.1186/s13059-024-03396-3. Genome Biol. 2024. PMID: 39350302 Free PMC article. - Cross-expression analysis reveals patterns of coordinated gene expression in spatial transcriptomics.
Sarwar A, Rue M, French L, Cross H, Chen X, Gillis J. Sarwar A, et al. bioRxiv [Preprint]. 2024 Sep 21:2024.09.17.613579. doi: 10.1101/2024.09.17.613579. bioRxiv. 2024. PMID: 39345494 Free PMC article. Preprint. - Scanning sample-specific miRNA regulation from bulk and single-cell RNA-sequencing data.
Zhang J, Liu L, Wei X, Zhao C, Luo Y, Li J, Le TD. Zhang J, et al. BMC Biol. 2024 Sep 27;22(1):218. doi: 10.1186/s12915-024-02020-x. BMC Biol. 2024. PMID: 39334271 Free PMC article. - Region of interest localization, tissue storage time, and antibody binding density-a technical note on the GeoMx® Digital Spatial Profiler.
Böning S, Schneider F, Huber AK, Langhoff D, Lin H, Kaczorowski A, Stenzinger A, Hohenfellner M, Duensing S, Duensing A. Böning S, et al. Immunooncol Technol. 2024 Aug 20;23:100727. doi: 10.1016/j.iotech.2024.100727. eCollection 2024 Sep. Immunooncol Technol. 2024. PMID: 39310847 Free PMC article. Review. - Deciphering breast cancer dynamics: insights from single-cell and spatial profiling in the multi-omics era.
Xiong X, Wang X, Liu CC, Shao ZM, Yu KD. Xiong X, et al. Biomark Res. 2024 Sep 18;12(1):107. doi: 10.1186/s40364-024-00654-1. Biomark Res. 2024. PMID: 39294728 Free PMC article. Review.
References
- Crossetto, N., Bienko, M. & van Oudenaarden, A. Nat. Genet. 16, 57–66 (2015). - DOI
- Lein, E., Borm, L. E. & Linnarsson, S. Science 358, 64–69 (2017). - DOI
- Bergenstråhle, J. & Lundeberg, J. Bioessays 42, 1900221 (2020). - DOI
- Ståhl, P. L. et al. Science 353, 78–82 (2016). - DOI
- Lubeck, E., Coskun, A. F., Zhiyentayev, T., Ahmad, M. & Cai, L. Nat. Methods 11, 360–361 (2014). - DOI
MeSH terms
LinkOut - more resources
Full Text Sources
Other Literature Sources