Identification of cryptic sites of DNA sequence amplification in human breast cancer by chromosome microdissection - PubMed (original) (raw)
Comparative Study
doi: 10.1038/ng1094-155.
Affiliations
- PMID: 7842014
- DOI: 10.1038/ng1094-155
Comparative Study
Identification of cryptic sites of DNA sequence amplification in human breast cancer by chromosome microdissection
X Y Guan et al. Nat Genet. 1994 Oct.
Abstract
We have performed microdissection of 16 putative homogeneously staining regions (hsrs) from nine different breast cancer cell lines in order to determine their chromosomal origin and composition. As expected, the most commonly amplified chromosomal band-region was 17q12 (containing ERBB2). However, regions not containing known oncogenes were also identified, including 13q31 (5/9 cases) and 20q12-13.2 (4/9 cases). The chromosomal composition of the integrated amplified DNA within each hsr was determined and in 13/16 cases (81%), hsrs were shown to be composed of two or more chromosomal regions. These studies shed light on the mechanism of formation of hsrs, and identify chromosomal regions likely to harbour genes amplified in breast cancer.
Comment in
- Visualizing tumour amplification.
Pinkel D. Pinkel D. Nat Genet. 1994 Oct;8(2):107-8. doi: 10.1038/ng1094-107. Nat Genet. 1994. PMID: 7842003 No abstract available.
Similar articles
- New amplified and highly expressed genes discovered in the ERBB2 amplicon in breast cancer by cDNA microarrays.
Kauraniemi P, Bärlund M, Monni O, Kallioniemi A. Kauraniemi P, et al. Cancer Res. 2001 Nov 15;61(22):8235-40. Cancer Res. 2001. PMID: 11719455 - Hybrid selection of transcribed sequences from microdissected DNA: isolation of genes within amplified region at 20q11-q13.2 in breast cancer.
Guan XY, Xu J, Anzick SL, Zhang H, Trent JM, Meltzer PS. Guan XY, et al. Cancer Res. 1996 Aug 1;56(15):3446-50. Cancer Res. 1996. PMID: 8758910 - Cloning of BCAS3 (17q23) and BCAS4 (20q13) genes that undergo amplification, overexpression, and fusion in breast cancer.
Bärlund M, Monni O, Weaver JD, Kauraniemi P, Sauter G, Heiskanen M, Kallioniemi OP, Kallioniemi A. Bärlund M, et al. Genes Chromosomes Cancer. 2002 Dec;35(4):311-7. doi: 10.1002/gcc.10121. Genes Chromosomes Cancer. 2002. PMID: 12378525 - Extrachromosomal double minutes and chromosomal homogeneously staining regions as probes for chromosome research.
Shimizu N. Shimizu N. Cytogenet Genome Res. 2009;124(3-4):312-26. doi: 10.1159/000218135. Epub 2009 Jun 25. Cytogenet Genome Res. 2009. PMID: 19556783 Review. - Amplification of oncogenes in human cancer cells.
Schwab M. Schwab M. Bioessays. 1998 Jun;20(6):473-9. doi: 10.1002/(SICI)1521-1878(199806)20:6<473::AID-BIES5>3.0.CO;2-N. Bioessays. 1998. PMID: 9699459 Review.
Cited by
- The transcriptional co-activator NCOA6 promotes estrogen-induced GREB1 transcription by recruiting ERα and enhancing enhancer-promoter interactions.
Tong Z, Liu Y, Yu X, Martinez JD, Xu J. Tong Z, et al. J Biol Chem. 2019 Dec 20;294(51):19667-19682. doi: 10.1074/jbc.RA119.010704. Epub 2019 Nov 19. J Biol Chem. 2019. PMID: 31744881 Free PMC article. - Architectures of somatic genomic rearrangement in human cancer amplicons at sequence-level resolution.
Bignell GR, Santarius T, Pole JC, Butler AP, Perry J, Pleasance E, Greenman C, Menzies A, Taylor S, Edkins S, Campbell P, Quail M, Plumb B, Matthews L, McLay K, Edwards PA, Rogers J, Wooster R, Futreal PA, Stratton MR. Bignell GR, et al. Genome Res. 2007 Sep;17(9):1296-303. doi: 10.1101/gr.6522707. Epub 2007 Aug 3. Genome Res. 2007. PMID: 17675364 Free PMC article. - SOX9 is a key component of RUNX2-regulated transcriptional circuitry in osteosarcoma.
Kim YI, Tseng YC, Ayaz G, Wang S, Yan H, du Bois W, Yang H, Zhen T, Lee MP, Liu P, Kaplan RN, Huang J. Kim YI, et al. Cell Biosci. 2023 Jul 25;13(1):136. doi: 10.1186/s13578-023-01088-2. Cell Biosci. 2023. PMID: 37491298 Free PMC article. - A common copy-number breakpoint of ERBB2 amplification in breast cancer colocalizes with a complex block of segmental duplications.
Marotta M, Chen X, Inoshita A, Stephens R, Budd GT, Crowe JP, Lyons J, Kondratova A, Tubbs R, Tanaka H. Marotta M, et al. Breast Cancer Res. 2012 Nov 26;14(6):R150. doi: 10.1186/bcr3362. Breast Cancer Res. 2012. PMID: 23181561 Free PMC article. - Binding of pro-prion to filamin A: by design or an unfortunate blunder.
Li C, Xin W, Sy MS. Li C, et al. Oncogene. 2010 Sep 30;29(39):5329-45. doi: 10.1038/onc.2010.307. Epub 2010 Aug 9. Oncogene. 2010. PMID: 20697352 Free PMC article. Review.
Publication types
MeSH terms
LinkOut - more resources
Full Text Sources
Other Literature Sources
Medical
Research Materials
Miscellaneous