Peptide length and sequence specificity of the mouse TAP1/TAP2 translocator - PubMed (original) (raw)
Peptide length and sequence specificity of the mouse TAP1/TAP2 translocator
T N Schumacher et al. J Exp Med. 1994.
Abstract
The transporter associated with antigen processing (TAP) delivers peptides to the lumen of the endoplasmic reticulum in an adenosine triphosphate (ATP) dependent fashion for presentation by major histocompatibility complex class I molecules. We show that the mouse TAP translocator (H-2b haplotype) selects peptides based on a minimal size of nine residues, and on the presence of a hydrophobic COOH-terminal amino acid. The preponderance of COOH-terminal hydrophobic amino acids in peptides capable of binding to mouse class I molecules thus fits remarkably well with the specificity of the TAP translocator. In addition to transport in the lumenal direction, efflux of peptide in the cytosolic direction is observed in an ATP- and temperature-dependent manner. By maintaining a low peptide concentration at the site of class I assembly, this efflux mechanism may ensure that class I molecules are loaded preferentially with high affinity peptides.
Similar articles
- Selective and ATP-dependent translocation of peptides by the MHC-encoded transporter.
Neefjes JJ, Momburg F, Hämmerling GJ. Neefjes JJ, et al. Science. 1993 Aug 6;261(5122):769-71. doi: 10.1126/science.8342042. Science. 1993. PMID: 8342042 - Nucleotide binding to the hydrophilic C-terminal domain of the transporter associated with antigen processing (TAP).
Müller KM, Ebensperger C, Tampé R. Müller KM, et al. J Biol Chem. 1994 May 13;269(19):14032-7. J Biol Chem. 1994. PMID: 8188683 - Selectivity of MHC-encoded peptide transporters from human, mouse and rat.
Momburg F, Roelse J, Howard JC, Butcher GW, Hämmerling GJ, Neefjes JJ. Momburg F, et al. Nature. 1994 Feb 17;367(6464):648-51. doi: 10.1038/367648a0. Nature. 1994. PMID: 8107849 - Peptide selection by MHC-encoded TAP transporters.
Momburg F, Neefjes JJ, Hämmerling GJ. Momburg F, et al. Curr Opin Immunol. 1994 Feb;6(1):32-7. doi: 10.1016/0952-7915(94)90030-2. Curr Opin Immunol. 1994. PMID: 8172678 Review. - Peptide transport in antigen presentation.
Marusina K, Monaco JJ. Marusina K, et al. Curr Opin Hematol. 1996 Jan;3(1):19-26. doi: 10.1097/00062752-199603010-00004. Curr Opin Hematol. 1996. PMID: 9372047 Review.
Cited by
- Trimming of antigenic peptides in an early secretory compartment.
Snyder HL, Yewdell JW, Bennink JR. Snyder HL, et al. J Exp Med. 1994 Dec 1;180(6):2389-94. doi: 10.1084/jem.180.6.2389. J Exp Med. 1994. PMID: 7964513 Free PMC article. - A detailed analysis of the murine TAP transporter substrate specificity.
Burgevin A, Saveanu L, Kim Y, Barilleau E, Kotturi M, Sette A, van Endert P, Peters B. Burgevin A, et al. PLoS One. 2008 Jun 11;3(6):e2402. doi: 10.1371/journal.pone.0002402. PLoS One. 2008. PMID: 18545702 Free PMC article. - Use of Functional Polymorphisms To Elucidate the Peptide Binding Site of TAP Complexes.
Geng J, Pogozheva ID, Mosberg HI, Raghavan M. Geng J, et al. J Immunol. 2015 Oct 1;195(7):3436-48. doi: 10.4049/jimmunol.1500985. Epub 2015 Aug 31. J Immunol. 2015. PMID: 26324772 Free PMC article. - Role of Human Leukocyte Antigen System as A Predictive Biomarker for Checkpoint-Based Immunotherapy in Cancer Patients.
Sabbatino F, Liguori L, Polcaro G, Salvato I, Caramori G, Salzano FA, Casolaro V, Stellato C, Col JD, Pepe S. Sabbatino F, et al. Int J Mol Sci. 2020 Oct 2;21(19):7295. doi: 10.3390/ijms21197295. Int J Mol Sci. 2020. PMID: 33023239 Free PMC article. Review. - Analysis and prediction of affinity of TAP binding peptides using cascade SVM.
Bhasin M, Raghava GP. Bhasin M, et al. Protein Sci. 2004 Mar;13(3):596-607. doi: 10.1110/ps.03373104. Protein Sci. 2004. PMID: 14978300 Free PMC article.
References
- Science. 1993 Aug 6;261(5122):769-71 - PubMed
- Eur J Immunol. 1993 Apr;23(4):840-5 - PubMed
- Biochemistry. 1967 Jul;6(7):1948-54 - PubMed
- Nature. 1989 Aug 10;340(6233):443-8 - PubMed
- Science. 1990 Apr 20;248(4953):367-70 - PubMed
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Molecular Biology Databases
Research Materials
Miscellaneous