Jose Torres | Polytechnic University of the Philippines (original) (raw)

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Papers by Jose Torres

Research paper thumbnail of Effect of Interocular Differences in Higher Order Aberrations on Binocular Visual Performance

Summary. We have analysed the influence of higher-order eye aberrations in binocular visual perfo... more Summary. We have analysed the influence of higher-order eye aberrations in binocular visual performance under mesopic conditions, measuring the aberrations in both eyes (with a Wasca aberrometer) of 35 emmetropic observers. Binocular visual performance was checked with two functions: binocular summation for contrast sensitivity function (CSF) and maximum disparity, a parameter that characterizes stereopsis. The results show that binocular summation

Research paper thumbnail of Accuracy of cognitive MRI-targeted biopsy in hitting prostate cancer-positive regions of interest

World Journal of Urology, 2015

Prostate cancer (PCa) diagnosis relies on clinical suspicion leading to systematic transrectal ul... more Prostate cancer (PCa) diagnosis relies on clinical suspicion leading to systematic transrectal ultrasound-guided biopsy (TRUSGB). Multiparametric magnetic resonance imaging (mpMRI) allows for targeted biopsy of suspicious areas of the prostate instead of random 12-core biopsy. This method has been shown to be more accurate in detecting significant PCa. However, the precise spatial accuracy of cognitive targeting is unknown. Consecutive patients undergoing mpMRI-targeted TRUSGB with cognitive registration (MRTB-COG) followed by robot-assisted radical prostatectomy were included in the present analysis. The regions of interest (ROIs) involved by the index lesion reported on mpMRI were subsequently targeted by two experienced urologists using the cognitive approach. The 27 ROIs were used as spatial reference. Mapping on radical prostatectomy specimen was used as reference to determine true-positive mpMRI findings. Per core correlation analysis was performed. Forty patients were included. Overall, 40 index lesions involving 137 ROIs (mean ROIs per index lesion 3.43) were identified on MRI. After correlating these findings with final pathology, 117 ROIs (85 %) were considered as true-positive lesions. A total of 102 biopsy cores directed toward such true-positive ROIs were available for final analysis. Cognitive targeted biopsy hit the target in 82 % of the cases (84/102). The only identified risk factor for missing the target was an anterior situated ROI (p = 0.01). In experienced hands, cognitive MRTB-COG allows for an accuracy of 82 % in hitting the correct target, given that it is a true-positive lesion. Anterior tumors are less likely to be successfully targeted.

Research paper thumbnail of Effects of a rapidly receding ice edge on the abundance, age structure and feeding of three dominant calanoid copepods in the Weddell Sea, Antarctica

Research paper thumbnail of Factores de progresión en las escoliosis idiopáticas

Seminarios de la Fundación Española de Reumatología, 2007

Research paper thumbnail of FPGA Implementation of Optimal Filtering Algorithm for TileCal ROD System

Research paper thumbnail of Identification of Prognostic Pathologic Parameters in Squamous Cell Carcinoma of the Penis

Pathology Case Reviews, 2005

Abstract Penile carcinomas are infrequent in the USA and Europe, but fairly frequent in some geog... more Abstract Penile carcinomas are infrequent in the USA and Europe, but fairly frequent in some geographical regions of Asia, Africa, and Latin America. The vast majority of tumors are squamous cell carcinoma, which disseminate in a loco regional manner to intrapenile ...

Research paper thumbnail of Evaluation of a commercial APD array (Avalanche PhotoDiode) for a readout detector in a hadrontherapy beam characterization application

IEEE Nuclear Science Symposuim & Medical Imaging Conference, 2010

ABSTRACT The aim of the present work is the characterization of the S8898–128–02 Avalanche PhotoD... more ABSTRACT The aim of the present work is the characterization of the S8898–128–02 Avalanche PhotoDiode array (APDs) from Hamamatsu Photonics. This work includes the implementation of a readout system as well as electronic noise estimation in APDs under several conditions varying integration times and clock frequencies.

Research paper thumbnail of Monographs of the Society for Research in Child Development

Encyclopedia of Special Education, 2008

Research paper thumbnail of How Can Neural Networks Speed Up Ecological Regionalization Friendly? - Replacement of Field Studies by Satellite Data using RBFs

Research paper thumbnail of Effects of Polyphenols from Grape Seeds on Renal Lithiasis

Oxidative Medicine and Cellular Longevity, 2015

Research paper thumbnail of Play

Encyclopedia of Special Education, 2008

Research paper thumbnail of Ecological sectorization process improvement through neural networks: Synthesis of vegetation data from satellite images using RBFs

Proceedings - 9th IEEE/ACIS International Conference on Computer and Information Science, ICIS 2010, 2010

Research paper thumbnail of Time of Flight measurements in PET systems using FPGAs

ABSTRACT This contribution shows how to perform Time of Flight (TOF) measurements in Positron Emi... more ABSTRACT This contribution shows how to perform Time of Flight (TOF) measurements in Positron Emission Tomography (PET) systems using low-cost Field-Programmable Gate Array (FPGA) device with a resolution better than 100 ps. This is achieved with a proper management of the FPGA internal resources and with an extremely careful device calibration process including both temperature and voltage compensation. The results of system calibration and different time measurements between multiple channels are presented.

Research paper thumbnail of Sniffing out problems for humans in space

Research paper thumbnail of MDL: a module description language for chained heterogeneous modular robots

2011 IEEE International Conference on Robotics and Biomimetics (ROBIO), 2011

Research paper thumbnail of Measurement of pion and proton response and longitudinal shower profiles up to 20 nuclear interaction lengths with the ATLAS Tile calorimeter

Nuclear Instruments & Methods in Physics Research Section a-Accelerators Spectrometers Detectors and Associated Equipment, 2010

Research paper thumbnail of Reply to: “The puzzling stability of monatomic gold wires is the result of small fluctuations”

Research paper thumbnail of Technological Sources of Productivity Growth in Germany, Japan, and the United States

Research paper thumbnail of Technological Sources of Productivity Growth in Germany, Japan, and the United States

Research paper thumbnail of A DPS-based system modelling method for 3D-structures simulation in manufacturing processes

Simulation Modelling Practice and Theory, 2009

In the field of engineering, guidelines and computerisation are important to facilitate the resol... more In the field of engineering, guidelines and computerisation are important to facilitate the resolution of complex problems. Engineers apply computer techniques of distributed problem solving (DPS) to design and simulation tasks, such as in industrial manufacture (e.g., simulation of aircraft, modelling of structures and mass customization). An important application of these and other computer-aided techniques is the design and manufacture

Research paper thumbnail of Effect of Interocular Differences in Higher Order Aberrations on Binocular Visual Performance

Summary. We have analysed the influence of higher-order eye aberrations in binocular visual perfo... more Summary. We have analysed the influence of higher-order eye aberrations in binocular visual performance under mesopic conditions, measuring the aberrations in both eyes (with a Wasca aberrometer) of 35 emmetropic observers. Binocular visual performance was checked with two functions: binocular summation for contrast sensitivity function (CSF) and maximum disparity, a parameter that characterizes stereopsis. The results show that binocular summation

Research paper thumbnail of Accuracy of cognitive MRI-targeted biopsy in hitting prostate cancer-positive regions of interest

World Journal of Urology, 2015

Prostate cancer (PCa) diagnosis relies on clinical suspicion leading to systematic transrectal ul... more Prostate cancer (PCa) diagnosis relies on clinical suspicion leading to systematic transrectal ultrasound-guided biopsy (TRUSGB). Multiparametric magnetic resonance imaging (mpMRI) allows for targeted biopsy of suspicious areas of the prostate instead of random 12-core biopsy. This method has been shown to be more accurate in detecting significant PCa. However, the precise spatial accuracy of cognitive targeting is unknown. Consecutive patients undergoing mpMRI-targeted TRUSGB with cognitive registration (MRTB-COG) followed by robot-assisted radical prostatectomy were included in the present analysis. The regions of interest (ROIs) involved by the index lesion reported on mpMRI were subsequently targeted by two experienced urologists using the cognitive approach. The 27 ROIs were used as spatial reference. Mapping on radical prostatectomy specimen was used as reference to determine true-positive mpMRI findings. Per core correlation analysis was performed. Forty patients were included. Overall, 40 index lesions involving 137 ROIs (mean ROIs per index lesion 3.43) were identified on MRI. After correlating these findings with final pathology, 117 ROIs (85 %) were considered as true-positive lesions. A total of 102 biopsy cores directed toward such true-positive ROIs were available for final analysis. Cognitive targeted biopsy hit the target in 82 % of the cases (84/102). The only identified risk factor for missing the target was an anterior situated ROI (p = 0.01). In experienced hands, cognitive MRTB-COG allows for an accuracy of 82 % in hitting the correct target, given that it is a true-positive lesion. Anterior tumors are less likely to be successfully targeted.

Research paper thumbnail of Effects of a rapidly receding ice edge on the abundance, age structure and feeding of three dominant calanoid copepods in the Weddell Sea, Antarctica

Research paper thumbnail of Factores de progresión en las escoliosis idiopáticas

Seminarios de la Fundación Española de Reumatología, 2007

Research paper thumbnail of FPGA Implementation of Optimal Filtering Algorithm for TileCal ROD System

Research paper thumbnail of Identification of Prognostic Pathologic Parameters in Squamous Cell Carcinoma of the Penis

Pathology Case Reviews, 2005

Abstract Penile carcinomas are infrequent in the USA and Europe, but fairly frequent in some geog... more Abstract Penile carcinomas are infrequent in the USA and Europe, but fairly frequent in some geographical regions of Asia, Africa, and Latin America. The vast majority of tumors are squamous cell carcinoma, which disseminate in a loco regional manner to intrapenile ...

Research paper thumbnail of Evaluation of a commercial APD array (Avalanche PhotoDiode) for a readout detector in a hadrontherapy beam characterization application

IEEE Nuclear Science Symposuim & Medical Imaging Conference, 2010

ABSTRACT The aim of the present work is the characterization of the S8898–128–02 Avalanche PhotoD... more ABSTRACT The aim of the present work is the characterization of the S8898–128–02 Avalanche PhotoDiode array (APDs) from Hamamatsu Photonics. This work includes the implementation of a readout system as well as electronic noise estimation in APDs under several conditions varying integration times and clock frequencies.

Research paper thumbnail of Monographs of the Society for Research in Child Development

Encyclopedia of Special Education, 2008

Research paper thumbnail of How Can Neural Networks Speed Up Ecological Regionalization Friendly? - Replacement of Field Studies by Satellite Data using RBFs

Research paper thumbnail of Effects of Polyphenols from Grape Seeds on Renal Lithiasis

Oxidative Medicine and Cellular Longevity, 2015

Research paper thumbnail of Play

Encyclopedia of Special Education, 2008

Research paper thumbnail of Ecological sectorization process improvement through neural networks: Synthesis of vegetation data from satellite images using RBFs

Proceedings - 9th IEEE/ACIS International Conference on Computer and Information Science, ICIS 2010, 2010

Research paper thumbnail of Time of Flight measurements in PET systems using FPGAs

ABSTRACT This contribution shows how to perform Time of Flight (TOF) measurements in Positron Emi... more ABSTRACT This contribution shows how to perform Time of Flight (TOF) measurements in Positron Emission Tomography (PET) systems using low-cost Field-Programmable Gate Array (FPGA) device with a resolution better than 100 ps. This is achieved with a proper management of the FPGA internal resources and with an extremely careful device calibration process including both temperature and voltage compensation. The results of system calibration and different time measurements between multiple channels are presented.

Research paper thumbnail of Sniffing out problems for humans in space

Research paper thumbnail of MDL: a module description language for chained heterogeneous modular robots

2011 IEEE International Conference on Robotics and Biomimetics (ROBIO), 2011

Research paper thumbnail of Measurement of pion and proton response and longitudinal shower profiles up to 20 nuclear interaction lengths with the ATLAS Tile calorimeter

Nuclear Instruments & Methods in Physics Research Section a-Accelerators Spectrometers Detectors and Associated Equipment, 2010

Research paper thumbnail of Reply to: “The puzzling stability of monatomic gold wires is the result of small fluctuations”

Research paper thumbnail of Technological Sources of Productivity Growth in Germany, Japan, and the United States

Research paper thumbnail of Technological Sources of Productivity Growth in Germany, Japan, and the United States

Research paper thumbnail of A DPS-based system modelling method for 3D-structures simulation in manufacturing processes

Simulation Modelling Practice and Theory, 2009

In the field of engineering, guidelines and computerisation are important to facilitate the resol... more In the field of engineering, guidelines and computerisation are important to facilitate the resolution of complex problems. Engineers apply computer techniques of distributed problem solving (DPS) to design and simulation tasks, such as in industrial manufacture (e.g., simulation of aircraft, modelling of structures and mass customization). An important application of these and other computer-aided techniques is the design and manufacture

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