Open‐source molecular modeling software in chemical engineering focusing on the Molecular Simulation Design Framework (original) (raw)

Introduction fo the molecular dynamic simulation

Cinthia Cevallos

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Development of models and methods for the molecular simulation of large systems and molecules

Jadran Vrabec

2010

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Introduction to Molecular Dynamics Simulation

Kun Yue

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Molecular Simulations as a Unifying Tool in Physics and Chemistry

Philippe Bopp

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Understanding Molecular Simulation: From Algorithm to Applications

Berend Smit

2001

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Understanding Molecular Simulation: From Algorithms to Applications

Berend Smit

Physics Today, 1997

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Molecular Dynamics Simulations in Biology , Chemistry and Physics

K. Kadau

2003

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Algorithms for Molecular Dynamics Simulations

Fredrik Hedman

2006

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Understanding Molecular Simulation���From Algorithms to Applications, volume 1 of Computational Science Series

Berend Smit

2002

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On industrial applications of molecular simulations

Ivo Nezbeda

Molecular Simulation, 2020

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9. Molecular Dynamics Simulations in Biology, Chemistry and Physics

Waheed Adeagbo

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On the Reduction of Molecular Degrees of Freedom in Computer Simulations

Aatto Laaksonen

Lecture Notes in Physics, 2004

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Force fields and molecular dynamics simulations

Keren Espinoza Huertas

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Molecular dynamics simulations

Wolfgang Paul

Journal of Physics: Condensed Matter, 2004

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Introduction to Molecular Dynamics

Ralf Schneider

Lecture Notes in Physics, 2008

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A test set for molecular dynamics algorithms

Eric Barth

Computational Methods for …, 2002

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A dynamic Monte Carlo method suitable for molecular simulations

Ulrich Suter

The Journal of Chemical Physics, 1992

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Application of Molecular Dynamics Simulation to Small Systems

Victor Rosas Garcia

2012

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Monte Carlo simulations and molecular dynamics

Berend Smit

2007

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Molecular dynamics simulations: advances and applications

Modesto Orozco

Advances and Applications in Bioinformatics and Chemistry, 2015

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M.DynaMix – a scalable portable parallel MD simulation package for arbitrary molecular mixtures

Aatto Laaksonen

Computer Physics Communications, 2000

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MDLab: A molecular dynamics simulation prototyping environment

Jesus Palafox Izaguirre

Journal of Computational Chemistry, 2009

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A Rapidly Mixing Monte Carlo Method for the Simulation of Slow Molecular Processes

Konstantin Fackeldey

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Molecular dynamics simulations: from structure function relationships to drug discovery

John Miners

In Silico Pharmacology, 2014

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Force Fields for Coarse-Grained Molecular Simulations from a Corresponding States Correlation

Andres Mejia

Industrial & Engineering Chemistry Research, 2014

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ORAC: A Molecular dynamics program to simulate complex molecular systems with realistic electrostatic interactions

Massimo Marchi

Journal of Computational Chemistry, 1997

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Molecular simulations: past, present, and future (a Topical Issue in EPJB)

Giovanni Ciccotti

The European Physical Journal B, 2022

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MDWiZ: A platform for the automated translation of molecular dynamics simulations

Riccardo Baron, Vitor Horta

Journal of Molecular Graphics and Modelling, 2014

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A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules

Keneth Merz, Piotr Cieplak

Journal of the American Chemical Society, 1995

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MODYLAS: A highly parallelized general-purpose molecular dynamics simulation program

noriyuki yoshii

International Journal of Quantum Chemistry, 2014

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