The Natural History of Biocatalytic Mechanisms (original) (raw)

Widespread Recruitment of Ancient Domain Structures in Modern Enzymes during Metabolic Evolution

Gustavo Caetano-Anolles

2013

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The Origin of Modern Metabolic Networks Inferred from Phylogenomic Analysis of Protein Architecture

Jay Mittenthal

Proceedings of The National Academy of Sciences, 2007

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Evolution of Domain Architectures and Catalytic Functions of Enzymes in Metabolic Systems

Henry Horng-Shing Lu

Genome Biology and Evolution, 2012

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The Classification and Evolution of Enzyme Function

Syed Asad Rahman

Biophysical Journal, 2015

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Early evolution of efficient enzymes and genome organization

Adám Kun

Biology Direct, 2012

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Evidence for the Existence of Elaborate Enzyme Complexes in the Paleoarchean Era

Rainer Merkl

Journal of the American Chemical Society, 2014

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Toward a Systems Biology Perspective on Enzyme Evolution

Shelley Copley

Journal of Biological Chemistry, 2012

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Enzyme evolution and the development of metabolic pathways

antonio lazcano

1997

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On the origin of enzymatic species

George Kenyon

Trends in Biochemical Sciences, 1993

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Origin and evolution of protein fold designs inferred from phylogenomic analysis of CATH domain structures in proteomes

S. Bukhari, Gustavo Caetano-Anolles

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Small protein folds at the root of an ancient metabolic network

Hagai Raanan

Proceedings of the National Academy of Sciences, 2020

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Emergence of diverse biochemical activities in evolutionarily conserved structural scaffolds of proteins

L Aravind

Current opinion in chemical …, 2003

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Evolution of Enzymes in Metabolism: A Network Perspective

Raphael Alves

Journal of Molecular Biology, 2002

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Origins and evolution of modern biochemistry: insights from genomes and molecular structure

L. Yafremava, Derek Caetano-Anollés, Gustavo Caetano-Anolles

Frontiers in bioscience : a journal and virtual library, 2008

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Functional evolution of PLP-dependent enzymes based on active-site structural similarities

Robert Powers

Proteins, 2014

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Structural, thermodynamic and catalytic characterization of an ancestral triosephosphate isomerase reveal early evolutionary coupling between monomer association and function

Adela Rodríguez-romero

The FEBS Journal, 2018

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Quantitative Comparison of Catalytic Mechanisms and Overall Reactions in Convergently Evolved Enzymes: Implications for Classification of Enzyme Function

Daniel Almonacid

Plos Computational Biology, 2010

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The Relationship Between Protein Structure and Function: A Comprehensive Survey Focusing on Enzymes

Hedi Hegyi

1999

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A universal molecular clock of protein folds and its power in tracing the early history of aerobic metabolism and planet oxygenation

Ying-Ying Jiang

Molecular biology and …, 2011

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Evolution of a Catalytic Mechanism

Mark Lunzer

Molecular biology and evolution, 2015

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Enzyme functional evolution through improved catalysis of ancestrally nonpreferred substrates

Todd Barkman

Proceedings of the National Academy of Sciences, 2012

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On the Early Evolution of Catabolic Pathways: A Comparative Genomics Approach. I. The Cases of Glucose, Ribose, and the Nucleobases Catabolic Routes

Mario José Flamenco Rivas

Journal of molecular evolution, 2017

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Rapid bursts and slow declines: on the possible evolutionary trajectories of enzymes

Matilda S Newton, Vickery Arcus

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Divergent Evolution of (??)8-Barrel Enzymes

Dr. Martina Henn-Sax

Biological Chemistry, 2001

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The origin and evolution of modern metabolism

Jay Mittenthal

International Journal of Biochemistry & Cell Biology, 2009

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Evolution of enzyme superfamilies

J. Gerlt

Current Opinion in Chemical Biology, 2006

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